EY664869

Overview
NameEY664869
Unique NameEY664869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 58/77 (75.32%), Postives = 69/77 (89.61%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG++DQS+QSFLDD Q+ +G+VLTC AYPTSDV IETHKE++L
Sbjct:   57 PDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_PHYES (Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 58/79 (73.42%), Postives = 70/79 (88.61%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 256
            CP DT++LDAAE+ GLDLPYSCRAGACSSC GKV +G+V+Q + SFLD++QM  G+VLTC AYPTSDVTIETHKEE+L+
Sbjct:   19 CPADTYVLDAAEDTGLDLPYSCRAGACSSCAGKVTAGSVNQEDGSFLDEEQMEAGWVLTCVAYPTSDVTIETHKEEDLS 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    8 SGNN---CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            SG N   CP DT++LDAAEE+GLDLPYSCRAGACSSC GKV +G V+Q + SFL+++QM  G+VLTC AYPTSDVTIETHKEE+L
Sbjct:   12 SGTNTITCPADTYVLDAAEESGLDLPYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSDVTIETHKEEDL 96          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.715e-30
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            +CPD+ +ILD AEEAG DLPYSCRAG+CSSC GK+  G VDQ++ +FLDDDQ+ EG+VLTC AYP SDVTIETHKE EL G
Sbjct:   64 DCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG 144          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 6.715e-30
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            CP D +ILD AEE G+DLPYSCRAG+CSSC GKVV G VDQS+ SFLDD+Q+  GFVLTC AYPTSDV IETHKEE+L
Sbjct:   70 CPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDL 147          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER_BRYMA (Ferredoxin OS=Bryopsis maxima PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 259
            +C +D+FILD AEE G+D+P+SCR+G+CS+C GK+  GTVDQSEQ+FLDDDQM EG+VLTC AYPTSD TI TH+EEE+ G
Sbjct:   18 DCDEDSFILDVAEEEGIDIPFSCRSGSCSTCAGKIEGGTVDQSEQTFLDDDQMEEGYVLTCVAYPTSDCTILTHQEEEMIG 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER3_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 2
Query:   20 CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            CPDD +ILDAAEE GLDLPYSCRAGACS+C GK++ G VDQS+QSFLDDDQ+  GFVLTC AYPTS+ TI TH+EE L
Sbjct:   20 CPDDQYILDAAEEQGLDLPYSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQVKAGFVLTCVAYPTSNATILTHQEESL 97          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_DUNSA (Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 2
Query:   29 DTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            D +ILDAAEEAGLDLPYSCRAGACSSC GKV +GT+DQS+QSFLDDDQ G GFVLTC AY TSD TI TH+EE L
Sbjct:   20 DAYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTIDQSDQSFLDDDQQGRGFVLTCVAYATSDCTISTHQEESL 94          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 58/77 (75.32%), Postives = 68/77 (88.31%), Query Frame = 2
Query:   23 PDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            PDD +ILDAAEE G+DLPYSCRAGACS+C GK+ +GTVDQS+QSFLDDDQ+  G+VLTC AYPTSD TI TH+EE+L
Sbjct:   22 PDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98          
BLAST of EY664869 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.496e-29
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 2
Query:   17 NCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 253
            NCP D +ILDAAEE G+DLPYSCRAGACS+C GK+V G+VDQS+QSFLD++Q+  GF+LTC AYPTSD  I+TH+EE L
Sbjct:   18 NCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96          
The following BLAST results are available for this feature:
BLAST of EY664869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER5_MAIZE5.141e-3075.32Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE... [more]
FER2_PHYES5.141e-3073.42Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1[more]
FER2_PHYAM5.141e-3071.76Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]
FER_CAPAN6.715e-3071.60Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP... [more]
FER1_PEA6.715e-3075.64Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PE... [more]
FER_BRYMA8.770e-3069.14Ferredoxin OS=Bryopsis maxima PE=1 SV=1[more]
FER3_CYACA8.770e-3075.64Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER2_DUNSA8.770e-3080.00Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1[more]
FER1_PLEBO8.770e-3075.32Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 ... [more]
FER2_CYACA1.496e-2970.89Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664869 ID=EY664869; Name=EY664869; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGGAAATAACTGTCCTGATGACACGTTTATTCTTGATGCTG
CTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGC
TCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCA
AAGCTTTCTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTG
CTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAG
CTCGCTGGTTAATAATGTGCTCTTGATATCTCATTATTATCTTCTCTTTT
ATGTGTTGTGTTTTGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAG
TAATTTGAGAATGATTCTTGTAATGTGTTTTTATTTCTTGTTGCAAAGAA
GTTGTAATTGCACCGGCCATGAATGCGCATCGTACCTAGAGGGTGAGGTT
TCTCATCCCATCCGAACATGGTACCGTTCTATAATTAAGAGTCAAGCAAG
AACAATGGATCTTTCGTTGTATTTCATCGGTAAAAAAAAAAAAAAAAAAA
AAAAAAA
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