CX672563

Overview
NameCX672563
Unique NameCX672563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 1.652e-117
Identity = 206/242 (85.12%), Postives = 225/242 (92.98%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP FEPGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 240          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 1.652e-117
Identity = 206/242 (85.12%), Postives = 225/242 (92.98%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP FEPGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 240          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 417.927 bits (1073), Expect = 3.116e-116
Identity = 204/242 (84.30%), Postives = 223/242 (92.15%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            MEGKEEDV VGAN++ E QPIGTAAQT+  KDY EPPPAP FEPGEL SWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCLGAICGA VVKGFQ   Y+  GGGAN+++ GY+KG GLGAEIVGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 241          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 409.068 bits (1050), Expect = 1.447e-113
Identity = 203/244 (83.20%), Postives = 222/244 (90.98%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDV-KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQ-KSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            ME KE+DV +GAN++ E QP+G AAQ+QD  KDY EPPPAPLFEP EL+SWSFYRAGIAEF+ATFLFLYITVLTVMGV +  SKC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQ LGAICGA VVKGF+ K ++  L GGAN ++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 244          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 1.037e-111
Identity = 202/242 (83.47%), Postives = 217/242 (89.67%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            MEGKEEDVR+GAN++ E   IGTAAQ  D KDY EPPPAPLFEPGEL SWSFYR GIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMI ALVYCTAGISG HINPAVTFGLFLARKLSLTRAVFY+IMQCLGAICG  VVKGFQ+  Y   GG  N+++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSL
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSL 241          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 401.364 bits (1030), Expect = 3.018e-111
Identity = 199/239 (83.26%), Postives = 214/239 (89.54%), Query Frame = 3
Query:   75 KEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            +EEDVRVG +R+ E QPIGTAA     +DY+EPP APLFE  ELSSWSFYRAGIAEFVATFLFLY+TVLTVMGVSKS SKC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGL LARKLSLTRAV+Y++MQCLGA+CGA VVK F  + YE  GGGAN +S GY+KGDGLGAE+VGTFVLVYTVFSATDAKR ARDSHVP LAPLPIGFAVFLVHLATIPITGTGINPARSL
Sbjct:   11 EEEDVRVGVDRFPERQPIGTAADDLG-RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSL 248          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.839e-92
Identity = 164/224 (73.21%), Postives = 183/224 (81.70%), Query Frame = 3
Query:  117 SQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            S+ +    +T   KDY +PPPAPL + GEL SWSFYRA IAEF+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QCLGAICG   VK F K+ Y  LGGGAN ++ GYSKG  LGAEI+GTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:    2 SKEVSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARS 225          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.402e-92
Identity = 169/220 (76.82%), Postives = 184/220 (83.64%), Query Frame = 3
Query:  156 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G        V+ + + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+I QCLGAICG  +VKGFQ S Y   GGGAN LS GYSKG GLGAEI+GTFVLVYTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSL
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSL 237          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.722e-90
Identity = 161/218 (73.85%), Postives = 179/218 (82.11%), Query Frame = 3
Query:  156 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSK-------SKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            KDY +PPPAPL +P EL+ WS YRA IAEF+AT LFLYITVLT++G  +         ++C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMI QC GAICGA + KGFQKS Y   GGG N +S GY+KG  LGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARS 234          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.249e-90
Identity = 161/220 (73.18%), Postives = 182/220 (82.73%), Query Frame = 3
Query:  156 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791
            KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VK FQ + ++  GGGAN L+ GYS+G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSL
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSL 238          
The following BLAST results are available for this feature:
BLAST of CX672563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
PIP11_VICFA1.652e-11785.12Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.652e-11785.12Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP15_ARATH3.116e-11684.30Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP2_PEA1.447e-11383.20Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE1.037e-11183.47Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE3.018e-11183.26Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH1.839e-9273.21Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP22_ORYSJ2.402e-9276.82Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE1.722e-9073.85Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP21_MAIZE2.249e-9073.18Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_17G03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17G03-M5-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672563 ID=CX672563; Name=CX672563; organism=Citrus sinensis; type=EST; length=793bp
TATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGTCTATTAAT
TTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGAGTGGGAGC
AAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCAGACTCAGG
ATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTCGAGCCCGGC
GAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAGTTTGTGGC
CACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGGCGTGTCCA
AATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCGCTTGGGCT
TTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCTGGCATTTCAGG
GGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGCCCGAAAGC
TGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTTTAGGGGCC
ATATGCGGTGCGGCCGTTGTAAAGGGCTTTCAGAAAAGCCAATATGAAAT
GCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAAGGGAGATG
GCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACACTGTCTTC
TCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTTCCTATATT
GGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGGTGCACTTGGCAACAA
TTCCTATCACAGGAACAGGCATTAACCCAGCAAGGAGTCTTGG
back to top