CX672563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11 Identity = 56/205 (27.32%), Postives = 90/205 (43.90%), Query Frame = 3 Query: 183 PLFEPGELSSWS--FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791 PL + L S S F + +AE + T+ FL + V+ K T + GIA +G + LVY ISG H NPAVT + L + Y+I Q +G+ AA ++ ++ G ++ G L + ++ + Y +F + + R + LA L +G V L + P++G +NP RSL Sbjct: 36 PLKKQDSLLSISVPFLQKLMAEVLGTY-FLIFAGCAAVAVNTQHDKAVT--LPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSL 235
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11 Identity = 56/188 (29.79%), Postives = 83/188 (44.15%), Query Frame = 3 Query: 234 IAEFVATFLFLYITVLTVMG-VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791 I + +A Y + G V+ ++SK + G+A +G + +VY ISG H NPAVT R+ + Y Q LGA A ++ ++E G L G S L E + TF L++ + ATD + + LA L +G + L L PI+G +NPARSL Sbjct: 47 IQKIIAEIFGTYFLIFAGCGAVTINQSKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPG---TLPAG-SDVQSLVLEFIITFYLMFVISGVATDNRA------IGELAGLAVGATILLNVLIAGPISGASMNPARSL 224
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 53/186 (28.49%), Postives = 81/186 (43.55%), Query Frame = 3 Query: 237 AEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791 AEFV TF+ ++ + K S G A G + ++ T ISG H+NP++T R + Y+ +Q L ++C A +KG + L GG + S E + +F L++ V + ATD + V LA + +G AV L L P TG +NP R+L Sbjct: 78 AEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACA---GLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGV---FHPFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRA------VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTL 251
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 56/191 (29.32%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 240 EFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG-------DGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 791 EF+ T + + + V GV K+K ++ G I +G + V+ + +S H+NPAVT G+ L L + Y++ Q GA+ G +V K YE N+L+ +S G L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR L Sbjct: 8 EFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDL 191 The following BLAST results are available for this feature:
BLAST of CX672563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672563 ID=CX672563; Name=CX672563; organism=Citrus sinensis; type=EST; length=793bpback to top |