CX672563

Overview
NameCX672563
Unique NameCX672563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.103e-26
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARS 217          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.103e-26
Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G  M+    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARS 217          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.665e-26
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARS 220          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            +F++A  AEF+A  +F+ +++ + +     K     V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARS 217          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.257e-24
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    S G GL  E++ TF LV+T+F++ D+KR    + V     L IG +V + HL  I  TG  +NPARS
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARS 217          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24
Identity = 76/197 (38.58%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  201 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            EL S SF+RA +AEF+ + L+      T++G+  S +      G+ G A AFG     LV     +SGGHINPA+T    LA +LSL RA+ Y++ Q LGA+ GA V+ G   +       G + L      G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGT-LGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARS 188          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24
Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            + +R  +AEF+ TF  + I + +  G +      +      IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAAV+K    S  E++GG G   ++ G S G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARS 201          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.800e-24
Identity = 72/198 (36.36%), Postives = 111/198 (56.06%), Query Frame = 3
Query:  201 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARS 788
            E+ S +F +A  AEF+AT +F++  + + +     K   +   +  I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL RAVFY++ Q +GAI GAA++ G   + Y        N L+   + G  + AE++ TF L   VFS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL--APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARS 189          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.657e-24
Identity = 72/197 (36.55%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  201 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARS 788
            E+ S +F +A  AEF+AT +F++  + + +     K   +   I  IA AFG  I  L      +SGGHINPA+T  L +  ++SL RAVFY++ Q +GAI GA ++ G             N L+   + G  +  E++ TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARG-NLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARS 189          
BLAST of CX672563 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.238e-24
Identity = 68/192 (35.42%), Postives = 104/192 (54.17%), Query Frame = 3
Query:  216 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 788
            + +R  +AEF+ TF  + I + + MG     +   T     IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAA++K    S  +++GG G   +    + G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARS 202          
The following BLAST results are available for this feature:
BLAST of CX672563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
AQP4_RAT5.103e-2638.02Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_HUMAN5.103e-2638.02Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_NOTAL6.665e-2638.02Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME2.533e-2537.50Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_BOVIN1.257e-2436.98Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
MIP_CHICK1.642e-2438.58Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_ANOGA1.642e-2436.98Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_SHEEP2.800e-2436.36Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG3.657e-2436.55Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_AEDAE6.238e-2435.42Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17G03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17G03-M5-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672563 ID=CX672563; Name=CX672563; organism=Citrus sinensis; type=EST; length=793bp
TATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGTCTATTAAT
TTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGAGTGGGAGC
AAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCAGACTCAGG
ATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTCGAGCCCGGC
GAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAGTTTGTGGC
CACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGGCGTGTCCA
AATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCGCTTGGGCT
TTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCTGGCATTTCAGG
GGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGCCCGAAAGC
TGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTTTAGGGGCC
ATATGCGGTGCGGCCGTTGTAAAGGGCTTTCAGAAAAGCCAATATGAAAT
GCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAAGGGAGATG
GCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACACTGTCTTC
TCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTTCCTATATT
GGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGGTGCACTTGGCAACAA
TTCCTATCACAGGAACAGGCATTAACCCAGCAAGGAGTCTTGG
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