CX672562

Overview
NameCX672562
Unique NameCX672562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.381e-31
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = -1
Query:  220 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 795
            G+ G A AFG     LV     +SGGHINPA+T    LA +LSL RA+ Y++ Q LGA+ GA V+ G   +       G + L      G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    + + +HW+FWAGP +GAALAAL +++ +
Sbjct:   40 GVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGT-LGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.333e-31
Identity = 81/225 (36.00%), Postives = 124/225 (55.11%), Query Frame = -1
Query:  223 IAEFVATFLFLYITVLPVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 888
            +AEF++TF+F++      +  +K  +    +  G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R + Y+I Q LG+I  +A++     S     G     LS+G   G  L  EIV TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++WAGP IG  +A L ++++
Sbjct:   24 LAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 134.42 bits (337), Expect = 8.333e-31
Identity = 79/225 (35.11%), Postives = 121/225 (53.78%), Query Frame = -1
Query:  217 IAEFVATFLFLYITVLPVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 888
            +AEF+ TF  + I +    G +      +      IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAAV+K    S  E++GG G   ++ G S G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++      + D W++W GP +G  +A   +++  +
Sbjct:   27 VAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.856e-30
Identity = 84/225 (37.33%), Postives = 122/225 (54.22%), Query Frame = -1
Query:  232 AEFVATFLFLYITVLPVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA------NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 885
            AEF+AT +F++  +      S  K   +   I  I+ AFG  I  L      +SGGHINPA+T  L +  ++SL RA+FY+  Q +GAI GA ++       Y +  G A      N LS   + G  +  E++ TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FW GP +GA LAA+ +
Sbjct:   16 AEFLATLIFVFFGL-----GSALKWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL-------YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAILY 221          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.136e-30
Identity = 82/220 (37.27%), Postives = 121/220 (55.00%), Query Frame = -1
Query:  232 AEFVATFLFLYITVLPVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 885
            AEF+AT +F++  +      S  K   +   I  IA AFG  I  L      +SGGHINPA+T  L +  ++SL RA FY+  Q +GAI GA ++ G   +     G    N L+   ++G  +  E++ TF L   +F++TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FW GP +GA LAA+ +
Sbjct:   16 AEFLATLIFVFFGL-----GSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV--APLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PAHWVFWVGPIVGAVLAAILY 221          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = -1
Query:  220 IAEFVATFLFLYITVLPVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 888
            +AEF++TF+F++     ++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTFG  +  +++  RA++Y I Q LGAI    +++        +       L+ G    +GL  EI+ TF LVY V+S   D KR +    + I+APL IG  V    L   P +G  +NPAR+ G AL+      W DHWI+W GPFIG+ALAAL ++ ++
Sbjct:   27 LAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 85/228 (37.28%), Postives = 122/228 (53.51%), Query Frame = -1
Query:  223 IAEFVATFLFLYITVLPVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 888
            +AEF++  +F++      M  SK      T   G+   + A    +F  V   A ISGGH+NPAVTFG F+   +SL +AV Y + Q LG++    ++K          GG   GA  LS G    + +  EIV TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W GPF+GAA+AAL + I+
Sbjct:   24 VAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK-------IATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 82/220 (37.27%), Postives = 121/220 (55.00%), Query Frame = -1
Query:  232 AEFVATFLFLYITVLPVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 885
            AEF+AT +F++  +      S  K   +   I  I+ AFG  I  L      +SGGHINPA+T  L +  ++SL RAVFY+  Q +GAI GA ++  +  +     G    N L+   + G  +  E++ TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FW GP +GA LAA+ +
Sbjct:   16 AEFLATLIFVFFGL-----GSALKWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAILY 221          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.203e-29
Identity = 82/235 (34.89%), Postives = 126/235 (53.62%), Query Frame = -1
Query:  220 IAEFVATFLFLYITVLPVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK----GFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 888
            +AEF++TF+F++     ++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTF   +  ++S+ RA++Y + Q +GAI    +++    G +   +         ++ G S+  GL  EI+ TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G AL+      W +HWI+W GPFIG ALAAL ++ +I
Sbjct:   27 LAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH--------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of CX672562 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.053e-29
Identity = 82/231 (35.50%), Postives = 120/231 (51.95%), Query Frame = -1
Query:  220 IAEFVATFLFLYITVLPVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLG------AEIVGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 888
            I+EF+AT +F++     V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG  +  ++SL RAV Y + Q LGA+    +++        +  GG  M   G++   G+G       E V TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G AL+      W  HW++W GPF+GA LA L ++ ++
Sbjct:   29 ISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR--------LATGG--MRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLV 242          
The following BLAST results are available for this feature:
BLAST of CX672562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
MIP_CHICK6.381e-3140.63Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP1_MEDTR8.333e-3136.00Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQP_ANOGA8.333e-3135.11Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_MOUSE1.856e-3037.33Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_HUMAN4.136e-3037.27Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP31_ARATH5.402e-3035.50Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP12_ORYSJ5.402e-3037.28Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP5_RAT5.402e-3037.27Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
TIP32_ARATH1.203e-2934.89Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_MAIZE2.053e-2935.50Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17G03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17G03-M5-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672562 ID=CX672562; Name=CX672562; organism=Citrus sinensis; type=EST; length=888bp
TTTTGAACAAGAAACAATAATTTATTTATAATAGGAATCGGCCATGAACA
TGTATAGTCATACACAATTCAAGAGCCACAAACACCGAAGGGTTGTACAT
ATACAGCAGATAATTAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTT
CATACATGGCTATTAATTGAACGGATCGAAATTAATGACTAATCATTTGG
ACTTGAATGGGATGGCCCTGATCACAATCTGATGATATAAAGCTGCAAGC
GCTGCTCCAATGAACGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGC
TTGGTCCTTGTTGTATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAA
TGCCTGTTCCTGTGATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCA
AATCCAATGGGCAGGGGTGCCAATATAGGAACATGAGAATCGCGGGCATT
GCGCTTGGCATCAGTGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTAC
CAACAATCTCGGCTCCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGC
ATGTTGGCACCGCCGCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTT
TACAACGGCCGCACCGCATATGGCCCCTAAACACTGCATTATCATGTAAA
AAACTGCCCTGGTAAGCGACAGCTTTCGGGCCAAGAACAGCCCGAATGTC
ACCGCTGGGTTAATGTGACCCCCTGAAATGCCAGCAGTGCAGTAGACTAG
AGCGAAGATCATGCCGCCAAAAGCCCAAGCGATGCCCTGGATTCCCACAG
TGGAACATTTGCTTTTGGATTTGGACACGCCCATCACTGGTAGAACAGTG
ATGTAAAGAAACAAGAACGTGGCCACAAACTCCGCAAT
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