CX672559

Overview
NameCX672559
Unique NameCX672559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = -2
Query:  302 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 562
            GE  +DC  + TMPNV+F I +  + L+P  YIL       + C SGF   D+PPP GPLWILGDVF+  +++VFD G  ++G A A
Sbjct:  309 GEYAVDCATLDTMPNVTFLINEVSYTLNPTDYILPDLVDGMQFCGSGFQGLDIPPPAGPLWILGDVFIRQFYSVFDRGNNQVGLAPA 395          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = -2
Query:  308 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFA 562
            G+  +DC  +  MP ++FTI    + ++P+QY L+  +G   VC SGF   D+ PP GPLWILGDVF+G Y++VFD G  R+G A
Sbjct:  304 GDYEVDCTVLNKMPTMTFTINGIGYQMTPQQYTLQDDDG---VCSSGFQGLDISPPAGPLWILGDVFIGQYYSVFDRGNNRVGLA 385          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = -2
Query:  356 INELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMG 598
            +++   ++P   GE +I C ++ ++P V+  +G K + LSPE Y LK  +    VC+SGFM  D+PPP GPLWILGDVF+G
Sbjct:  284 LHKAIGAVPLIQGEYMIPCEKVSSLPQVTLKLGGKDYTLSPEDYTLKVSQAGTTVCLSGFMGMDIPPPGGPLWILGDVFIG 364          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = -2
Query:  299 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 694
            G    CS     +V     L    T    ++ I     +  N  GE ++ C  I T+PN+ FTI    + L P  Y+L++ +G    C SGF   D+P   G LWILGDVF+  Y TVFD G  ++G A  A
Sbjct:  261 GQVIACSGSCQAIVDTGTSLLSGPTN--AIASIQGYIGASQNANGEMVVSCSAINTLPNIVFTINGVQYPLPPSAYVLQSQQG----CTSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRGNNQVGLAPVA 386          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  302 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 562
            GE  +DC  +  MPNV+F I    + LSP  YIL       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  ++G A A
Sbjct:  310 GEYAVDCATLNMMPNVTFLINGVSYTLSPTAYILPDLVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRKFYSVFDRGNNQVGLAPA 396          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  302 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 562
            GE  ++C  +  MP+V+FTI    + LSP  Y L       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  R+G A A
Sbjct:  313 GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPA 399          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = -2
Query:  302 VEKENVSAGDSAVC--SACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 718
            +  + VS G S +     CE+ V    + +    +  K+   I +   +    + E ++ C ++PT+P++SF +G + + LS   Y+L+      ++C     A D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  263 ITMKGVSVGSSTLLCEEGCEVVVDTGSSFISAPTSSLKL---IMQALGAKEKRLHEYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 400          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = -2
Query:  302 ESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 559
            E +++C ++PT+P++SF +G + + L+ + Y+L+   G  ++C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  317 EYVVNCNQVPTLPDISFHLGGRAYTLTSKDYVLQDPYGNEDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDRHNNRIGFALA 402          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = -2
Query:  302 ESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 559
            E +++C ++PT+P++SF +G + + LS   Y+L+      ++C     A D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  316 EYVVNCSQVPTLPDISFDLGGRAYTLSSTDYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of CX672559 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = -2
Query:  302 GESII-DCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 562
            GE +  DC  I T+PNV+ T+  + F L+P++Y+L+  E     C+SGFM  +L    G  WILGDVF+  Y+TVFD G  ++GFA A
Sbjct:  295 GEGVFSDCSVINTLPNVTITVAGREFVLTPKEYVLEVTEFGKTECLSGFMGIEL--NMGNFWILGDVFISAYYTVFDFGNKQVGFATA 380          
The following BLAST results are available for this feature:
BLAST of CX672559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CATE_MOUSE1.303e-1747.13Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATEB_XENLA8.443e-1747.06Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATD_SHEEP1.103e-1645.68Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
PEPA_RHIFE9.335e-1635.61Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CATE_RAT9.335e-1645.98Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
CATE_HUMAN1.592e-1544.83Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
RENI2_MOUSE1.032e-1429.79Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
RENI_CANFA1.761e-1437.21Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI1_MOUSE1.761e-1438.37Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
CATD_DICDI1.761e-1445.45Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_17G01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17G01-M1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672559 ID=CX672559; Name=CX672559; organism=Citrus sinensis; type=EST; length=731bp
TTTAAAGGAAAAAACGAAGTCCAATGACAGTTATAAGATGAAATTTCTCC
AAATAAGTAAAGCTATCACGTCAGAATATCATAAAATTGAAGTACTTTAA
ACATAGGATGATAGGATTTTACATAAGTATATATCAGCATATCATCTGTG
GTGATGATGATGATAGTTATGCATAAAAGCATACTGATCGTTTTACAGTA
CATGAAAACCATAATCTACATTCTACAACCCTCCTCCTCATATGAGCAGG
TGATGATCGCTGCTACTACATAAAAACTTGACAGTAAGTAGATCATTACG
CAGCCTCAGCAAAGCCGATCCGGAGCTTACCAGAGTCGAAAACAGTGTGA
TAAACCCCCATGAATACATCTCCCAGAATCCACAGAGGACCCCTTGGAGG
AGGCAGGTCGAAAGCCATGAAGCCACTGATGCAGACTTCTGCAATCCCTT
CTCCGGTTTTCAGAATATACTGCTCTGGAGAGAGGTTGAAAATTTTGTCT
CCGATGGTGAATGAAACATTTGGCATGGTTGGAATGCGACCACAGTCAAT
AATTGATTCTCCCATCGGATTTGGCAGGCTGTCGCAGAGCTCATTTATAT
AACTGAGTACTTTCTCCTTTGTTTGCTTTTGTTTTAGCTGATTCTGGACC
CAAACCACGGTCATTTCACAAGCACTGCACACAGCACTATCCCCGGCTGA
TACGTTTTCCTTCTCAACCACGGTCTTGATC
back to top