CX672558

Overview
NameCX672558
Unique NameCX672558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.610e-29
Identity = 63/168 (37.50%), Postives = 98/168 (58.33%), Query Frame = 3
Query:  261 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            P  N++D+ YFGEI IG+PPQNF ++FDTGSS LWVPS+ C  S +C  H+R+   +S+TY    ++  + YG GS++                   F  +  E +  F  + FDGI+G+ +  +AV +   V  NM++QG +++ +FSF+ +  P  E GGE++ GG
Sbjct:   65 PFTNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGG 231          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.103e-29
Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 3
Query:  183 RKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 722
            +K++Y    GVS  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS  WVPS  C  S +C  H R+  RKS+T+  +GK   I YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   +VPV+DNM+++ LV++++FS +++R
Sbjct:   45 QKQQY----GVSSEYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFSVYMDR 217          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.746e-29
Identity = 68/169 (40.24%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  261 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSS LWVPS  C  S++C  H+++    S+T+    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ + D+  G  ++ GG
Sbjct:   64 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDS--GSVVLLGG 228          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.587e-29
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 3
Query:  261 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            PL N+MD +YFG I IG+PPQ F+VIFDTGSS LWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+GS++G                  F  +  E       + FDGI+GL +  I+   A PV+DNM  QGLVS+++FS +L+ +   + G  ++FGG
Sbjct:   66 PLVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFSVYLSSND--QSGSVVMFGG 230          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.587e-29
Identity = 67/181 (37.02%), Postives = 109/181 (60.22%), Query Frame = 3
Query:  183 RKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 725
            +K++Y    G+S  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS  WVPS  C  S +C  H R+  RKS+T+  +GK   I+YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   ++PV+DNM+ + LV++++FS +++R+
Sbjct:   45 QKQQY----GISSKYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN 218          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.684e-29
Identity = 66/166 (39.76%), Postives = 101/166 (60.84%), Query Frame = 3
Query:  264 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFG 761
            L N++D QYFG+I IG+PPQ F+V+FDTGSS LWVPS  C  S++C  H R+   KS+T+  + KS  I YG+GS+ G                     +T+E    F  + FDGI+GL +  +A   +VPV+DNM+++ LV++++FS +++R+   E+G  +  G
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAQDLFSVYMSRN---EQGSMLTLG 227          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.990e-29
Identity = 67/164 (40.85%), Postives = 94/164 (57.32%), Query Frame = 3
Query:  273 FMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            +MDA Y+GEI IG+PPQNF V+FDTGSS LWV S  C  S +C  H+RY   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L        GG+IVFGG
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGG 232          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.990e-29
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 3
Query:  228 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            H+  DS     P++N++D  Y G I +G+PPQ F VIFDTGS+ LWVPS  C  S +C  H+ +   +S+T+   G+  ++ YG+G +SGF                 F  +  E      LA FDGI+GL +  ++V    PV+DN+  QGL+S+++F+F+L+R    ++G  ++FGG
Sbjct:   54 HKHADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLWNQGLLSQKLFAFYLSR--KGKKGSVVMFGG 229          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28
Identity = 67/164 (40.85%), Postives = 94/164 (57.32%), Query Frame = 3
Query:  273 FMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            +MDA YFGEI IG+PPQNF V+FDTGSS LWV S  C  S +C  H+R+   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L        GG+IVFGG
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGG 232          
BLAST of CX672558 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28
Identity = 73/203 (35.96%), Postives = 106/203 (52.22%), Query Frame = 3
Query:  162 LNAARITRKERYMGGAGVSGVHHRLGDSDEDIL--PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSYLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 764
            +   R T +E+ +    +    +RL  +D  I   PL+N++D  Y G I IG+PPQ F V+FDTGS+ LWVP   C  S +CY H  +  + S+++ E+G    I YGSG I GF                 F  +  E     L   FDGI+GL F  + + D +P++DN+   G  SE VF+F+LN   +  EG  ++FGG
Sbjct:   24 MKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYGFDSL--PFDGILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLN--TNKPEGSVVMFGG 221          
The following BLAST results are available for this feature:
BLAST of CX672558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PEPB_CANFA1.610e-2937.50Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
CHYM_SHEEP2.103e-2938.33Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
PEPA_PIG2.746e-2940.24Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA_SORUN3.587e-2941.07Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
CHYM_BOVIN3.587e-2937.02Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
CHYM_CALJA4.684e-2939.76Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPC_MOUSE7.990e-2940.85Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PAG_HORSE7.990e-2936.87Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PEPC_RAT1.044e-2840.85Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PAG2_BOVIN1.044e-2835.96Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_17G01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17G01-M1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672558 ID=CX672558; Name=CX672558; organism=Citrus sinensis; type=EST; length=765bp
TCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACTT
CTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTCC
TGCTTCCTCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTAG
ATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATATG
GGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATGA
AGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAGA
TTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGGC
AGTTCCTATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCTG
CTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAAA
TTGGAAAATCCTGTGAAATAAACTATGGATCTGGATCAATTTCTGGCTTC
TTCAGTCAAGACAATGTTGAAGTTGGGGATGTTGTTGTCAAGGATCAGGT
TTTCATTGAGGCTACACGAGAAGGGAGTCTCACTTTTCTATTGGCAAGGT
TTGATGGAATAATAGGGCTTGGGTTCCGGGAAATTGCAGTTGGGGATGCT
GTGCCTGTGTGGGACAATATGGTTGAGCAGGGCCTTGTAAGCGAGGAGGT
CTTCTCATTCTGGCTCAACAGGGATCCAGACGCTGAAGAGGGTGGAGAGA
TTGTTTTTGGTGGTG
back to top