EY664845

Overview
NameEY664845
Unique NameEY664845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: ABCC8_RAT (ATP-binding cassette transporter sub-family C member 8 OS=Rattus norvegicus GN=Abcc8 PE=1 SV=4)

HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22
Identity = 60/175 (34.29%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  176 GIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAA 700
            G++ +K L   LLN +  APM F+++TPLG +L+R SSD + +D  +P +L     +T    S L V++ VT   L   +P+  +   +Q+Y+   +++L +L+ TT+  + +H AE++ G   I AF  E RF  K L+  D+N        AAN WL  R+E + A  + +AA
Sbjct: 1090 GLKVAKRLHRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTLLCVSALAVISYVTPVFLVALLPLAVVCYFIQKYFRVASRDLQQLDDTTQLPLLSHFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVRMEYIGACVVLIAA 1264          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.944e-22
Identity = 65/234 (27.78%), Postives = 124/234 (52.99%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTW-QVLF--VSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVLLPXGTLPLDYWNGPFYGLSLN 778
            ST   ++V  +   ++++  + R+ S    G++++  + + L++ L  AP  F+D TP GR+L+R SSDL  +D  +PF L   +    N    LG++ V+++ QVLF  + +P  ++  +LQ +Y +T++EL RL+  ++S +     E++ G+  I AF+ E+ F  + ++ +       +    A+ WL  RL+ L +  +   A   VL   G  P+ +      GL+L+
Sbjct:  672 STSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHNALISKLINAPTQFFDQTPSGRILNRFSSDLYTIDDSLPFILNILL---ANFVGLLGIIVVLSYVQVLFLLLLLPFWYIYSKLQVFYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKSEEHFVGRFIEHLTLYQRTSYSEIIASLWLSLRLQLLGSMIVLFVAVMAVLGSGGNFPISFGTPGLVGLALS 902          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.538e-22
Identity = 67/242 (27.69%), Postives = 124/242 (51.24%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNV-------STLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVLLPXGTL 733
            +  +  N WL+   ++P V          RL V Y  +G +    +   S++  + GI +S+ L   LL ++ R+PMSF++ TP G +++R S +L  VD  +P  +   +G+  +    + ++ + T     +  P+  +   +QR+Y A++++L RL   ++S V +H  E++ G   I AFE ++RF  ++   +D N   ++ +  AN WL  RLE +  NCI L A    ++   +L
Sbjct:  983 VSALASNYWLSLWTDDPPVVNGTQANRNFRLSV-YGALGILQGAAIFGYSMAVSIGGIFASRRLHLDLLYNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVIIPPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECV-GNCIVLFAALFAVISRHSL 1222          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP1_RAT (Multidrug resistance-associated protein 1 OS=Rattus norvegicus GN=Abcc1 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.330e-22
Identity = 60/209 (28.71%), Postives = 113/209 (54.07%), Query Frame = 2
Query:  107 VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVLLPXGTL 733
            VY  +G +  + +   S++  + GI +S+ L   LL ++ R+PMSF++ TP G +++R S +L  VD  +P  +   +G+  +    + ++ + T     +  P+  +   +QR+Y A++++L RL   ++S V +H  E++ G   I AFE ++RF  ++   +D N   ++ +  AN WL  RLE +  NCI L A    ++   +L
Sbjct: 1019 VYGALGILQGVAVFGYSMAVSIGGIFASRRLHLDLLQNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVIIPPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIRQSDLKVDENQKAYYPSIVANRWLAVRLECV-GNCIVLFAALFAVISRHSL 1226          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 4.330e-22
Identity = 62/199 (31.16%), Postives = 108/199 (54.27%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAA 700
            +V+ L+  +  +  +  S++    G++ +K L   LLN +  APM F+++TPLG +L+R SSD + +D  +P +L     +T    S L V++ VT   L   +P+  +   +Q+Y+   +++L +L+ TT+  + +H AE++ G   I AF  E RF  K L+  D+N        AAN WL   +E + A  + +AA
Sbjct: 1066 MVFTLLCSLGIVLCLVTSVTVEWTGLKVAKRLHRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTLLCVSALTVISYVTPVFLVALLPLAVVCYFIQKYFRVASRDLQQLDDTTQLPLVSHFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVCMEYIGACVVLIAA 1264          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22
Identity = 67/204 (32.84%), Postives = 116/204 (56.86%), Query Frame = 2
Query:  101 IVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAV----VTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAA 700
            + VY  I  V++L  + R++      ++++ +L  +LL+ +  AP++F+++TP GR+L+R SSD++  D  +PF L   +    NA   LG+LAV    + W +L +  P+  +   +QR+Y A+++EL RL   T S + +HLA+++AG   + A     RF  +NL L++ N    F T A  +WL  RL+ + A  +S  A
Sbjct:  968 LTVYATIAGVNSLCTLLRAVLFAAGTLQAAATLHRRLLHRVLMAPVTFFNATPTGRILNRFSSDVACADDSLPFILNILL---ANAAGLLGLLAVLGSGLPWLLLLLP-PLSIMYYHVQRHYRASSRELRRLGSLTLSPLYSHLADTLAGLSVLRATGATYRFEEENLRLLELNQRCQFATSATMQWLDIRLQLMGAAVVSAIA 1167          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21
Identity = 68/243 (27.98%), Postives = 118/243 (48.56%), Query Frame = 2
Query:   29 IGQILQNSWLAANVENPNVSTLRLIV-----VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSL---------IFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +    Q  WL+   ++P V   ++       ++ L+G +  + L +   +  + G R+S  LF  LL  + R+P+ F++ TP+G +L+R S +  IVD+D+P  +         +  VG   +  + L ++A+         +P++ L    Q  Y AT  +L RL   + S V +HLAE+  G+  + AF+ +  F A++  L+D N    F    A+ WL   LE L    + +AA C VL
Sbjct:  958 VASFCQGYWLSLWADDPVVDGKQMHSALRGSIFGLLGCLQAIGLFASMAAVFLGGARASCLLFRSLLWDVARSPIGFFERTPVGNLLNRFSKETDIVDVDIPDKMRTLLTYAFGLLEVGLAVSMATPLAIVAI---------LPLMLLYAGFQSLYVATCCQLRRLESASYSSVCSHLAETFQGSQVVRAFQAQGPFTAQHDALMDENQRISFPRLVADRWLAANLELLGNGLVFVAATCAVL 1191          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21
Identity = 69/250 (27.60%), Postives = 130/250 (52.00%), Query Frame = 2
Query:   47 NSWLAANVENP------NVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVLLPXGTLPLDYWNGPFYGLSLN 778
            N WL+A   +       N +++RL  VY  +G +  L +M  + + VV  I++++ L   LL++  R+P SF+D+TP GR+L+R S D+ ++D  +  +++  + +   + S + V+   T   + V +P+  L   +QR+Y AT+++L RL   ++S + +H +E++ G   I A+     F   +   +D N    +   A+N WL   +E +  NC+ L A    ++   +L     N    GLS++
Sbjct:  985 NVWLSAWSNDAEEHGQQNKTSVRL-GVYAALGILQGLLVMLSAFTMVVGAIQAARLLHEALLHNKIRSPQSFFDTTPSGRILNRFSKDIYVIDEVLAPTILMLLNSFFTSISTIMVIVASTPLFMVVVLPLAVLYGFVQRFYVATSRQLKRLESISRSPIFSHFSETVTGTSVIRAYGRIQDFKVLSDTKVDNNQKSSYPYIASNRWLGVHVEFV-GNCVVLFAALFAVIGRNSL-----NPGLVGLSVS 1227          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21
Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 2
Query:   53 WLAANVENPNVS-TLRLIVVYLLIGFV----STLFL-MSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAA 700
            WLA      +++ T +    Y + GF     + +FL +  SL+   +G+ ++K+L   LLN +   P+ F+D+TPLG +L+R S+D +I+D  +P +L     +T    S +G+++  T   L   +P+      +Q+Y+   +K+L  L+ +T+  +  H +E+  G   I AF  E RF  + L+L DTN   +    AAN WL  R + L A CI L A
Sbjct: 1014 WLATWTSEYSINNTGKADQTYYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLVALVPLGVAFYFIQKYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHEARFKQRMLELTDTNNIAYLFLSAANRWLEVRTDYLGA-CIVLTA 1234          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21
Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 2
Query:   53 WLAANVENPNVS-TLRLIVVYLLIGFV----STLFL-MSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAA 700
            WLA      +++ T +    Y + GF     + +FL +  SL+   +G+ ++K+L   LLN +   P+ F+D+TPLG +L+R S+D +I+D  +P +L     +T    S +G+++  T   L   +P+      +Q+Y+   +K+L  L+ +T+  +  H +E+  G   I AF  E RF  + L+L DTN   +    AAN WL  R + L A CI L A
Sbjct: 1014 WLATWTSEYSINNTGKADQTYYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLVALLPLGVAFYFIQKYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRFKQRMLELTDTNNIAYLFLSAANRWLEVRTDYLGA-CIVLTA 1234          
The following BLAST results are available for this feature:
BLAST of EY664845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
ABCC8_RAT1.488e-2234.29ATP-binding cassette transporter sub-family C memb... [more]
AB13C_ARATH1.944e-2227.78ABC transporter C family member 13 OS=Arabidopsis ... [more]
MRP1_MOUSE2.538e-2227.69Multidrug resistance-associated protein 1 OS=Mus m... [more]
MRP1_RAT4.330e-2228.71Multidrug resistance-associated protein 1 OS=Rattu... [more]
ABCC8_CRICR4.330e-2231.16ATP-binding cassette transporter sub-family C memb... [more]
MRP7_HUMAN9.645e-2232.84Multidrug resistance-associated protein 7 OS=Homo ... [more]
MRP6_RAT1.260e-2127.98Multidrug resistance-associated protein 6 OS=Rattu... [more]
MRP3_MOUSE1.645e-2127.60Canalicular multispecific organic anion transporte... [more]
ABCC9_RABIT1.645e-2131.53ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_HUMAN1.645e-2131.53ATP-binding cassette transporter sub-family C memb... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664845 ID=EY664845; Name=EY664845; organism=Citrus sinensis; type=EST; length=914bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGANCATT
ANGGCTTTTGAGGANGAAGATCGGTTTTTTGCAAAGAACCTTGACCTCAT
TGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGGT
TGATCCAACGCCTAGAAACACTCAGTGCAAACTGTATATCCCTCGCAGCA
TTCTGTATGGTTTTGCTTCCTNCTGGAACTTTACCCCTGGATTATTGGAA
TGGCCCNTTCTATGGTCTTTCGTTAAACAGTCCCTAGTATGTCAATCAAA
CCAGTGACTCTAGCAAATATACATTTCTGTAAAAGACTNACCATACATGC
ATGNACCAGTGAGCCCCTGAGTAGAAGAAACACCGGCCCCACCACTGGCC
CGTGTGGGAAAGGG
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