EY664845

Overview
NameEY664845
Unique NameEY664845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_COLGU (Cystic fibrosis transmembrane conductance regulator OS=Colobus guereza GN=CFTR PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14
Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14
Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 2
Query:  104 VVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            V Y+ +G   TL  M   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V+AV+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  915 VFYIYVGVADTLLAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 68/256 (26.56%), Postives = 121/256 (47.27%), Query Frame = 2
Query:   44 QNSWLAANVENPNVSTLRLI--VVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVLLPXGTLPLDYWNGPFYGLSLNSP*YVNQTS 805
            QN+  A NV+     T   +  +VY+       +F + +  +     + +S SL +++ N + R+PMSF+D+TP GR+++R S D+  +D+ +PF     +         L ++A V   VL V   +  + + L R +    +EL ++   ++S   +H+  SI G   I A++ +D   +K   L D N+S       A  W   R++ L    +++  F + LL   TL     +    GLSL+   Y+ Q S
Sbjct:  828 QNNKTACNVDQTLQDTKHHMYQLVYIASMVSVLMFGIIKGFTFTNTTLMASSSLHNRVFNKIVRSPMSFFDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFFMVVFILVIMAAVFPVVLVVLAGLAVIFLILLRIFHRGVQELKQVENISRSPWFSHITSSIQGLGVIHAYDKKDDCISKFKTLNDENSSHLLYFNCALRWFALRMDIL----MNIVTFVVALLV--TLSFSSISASSKGLSLS---YIIQLS 1074          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 62/230 (26.96%), Postives = 109/230 (47.39%), Query Frame = 2
Query:   47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            NS ++AN     +  ST    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +      +  F  +L
Sbjct:  894 NSTISANSSYAVIITSTSAYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNALKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIVTFIILRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMVFVIFFIVVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CARPS (Cystic fibrosis transmembrane conductance regulator OS=Carollia perspicillata GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 56/227 (24.67%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            NS  + N  N  +  +T    + Y+ +G   +LF +   R L  V   I  SK L  ++L+S+  APMS  +    G +L+R S D +I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F A     ++ + + +F   +   W   R+E +         F  +L
Sbjct:  895 NSTGSTNSSNAFIVTNTSHFYLFYIYVGVADSLFALGFIRGLPLVHSLITVSKILHHKMLHSVLHAPMSTLNMLKAGEILNRFSKDTAILDDLLPLTIFDFIQLALIVIGAIAVVSVLQPYIFLATVPVITAFITLRAYFLPTSQQLKQLESEGRSPIFTHLVTSLRGLWTLRAFGRQPYFEALFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1121          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_ATEAB (Cystic fibrosis transmembrane conductance regulator OS=Atelerix albiventris GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 55/215 (25.58%), Postives = 103/215 (47.91%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +T    ++Y+ +G   TL  +   R L  V   I +SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  911 NTSSYYIIYIYVGVADTLLALGLLRGLPLVHTLITASKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLILIVIGAVIVVSVLEPYIFLATVPVIIAFVMLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1122          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_AOTNA (Cystic fibrosis transmembrane conductance regulator OS=Aotus nancymaae GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKMLHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_SAIBB (Cystic fibrosis transmembrane conductance regulator OS=Saimiri boliviensis boliviensis GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 52/212 (24.53%), Postives = 99/212 (46.70%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F       ++ + + +F   +   W   R+E +         F  +L
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTASWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CALMO (Cystic fibrosis transmembrane conductance regulator OS=Callicebus moloch GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_HORSE (Cystic fibrosis transmembrane conductance regulator OS=Equus caballus GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 58/215 (26.98%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 STSSYYVFYIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDMAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
The following BLAST results are available for this feature:
BLAST of EY664845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
CFTR_COLGU1.492e-1427.75Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CERAE1.492e-1427.75Cystic fibrosis transmembrane conductance regulato... [more]
MRP9_MOUSE1.948e-1426.56Multidrug resistance-associated protein 9 OS=Mus m... [more]
CFTR_MICMU1.948e-1426.96Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CARPS4.340e-1424.67Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_ATEAB4.340e-1425.58Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_AOTNA4.340e-1426.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_SAIBB5.668e-1424.53Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CALMO5.668e-1426.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_HORSE7.402e-1426.98Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664845 ID=EY664845; Name=EY664845; organism=Citrus sinensis; type=EST; length=914bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGANCATT
ANGGCTTTTGAGGANGAAGATCGGTTTTTTGCAAAGAACCTTGACCTCAT
TGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGGT
TGATCCAACGCCTAGAAACACTCAGTGCAAACTGTATATCCCTCGCAGCA
TTCTGTATGGTTTTGCTTCCTNCTGGAACTTTACCCCTGGATTATTGGAA
TGGCCCNTTCTATGGTCTTTCGTTAAACAGTCCCTAGTATGTCAATCAAA
CCAGTGACTCTAGCAAATATACATTTCTGTAAAAGACTNACCATACATGC
ATGNACCAGTGAGCCCCTGAGTAGAAGAAACACCGGCCCCACCACTGGCC
CGTGTGGGAAAGGG
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