EY664845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14 Identity = 56/215 (26.05%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 +T V Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFVLLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 56/207 (27.05%), Postives = 99/207 (47.83%), Query Frame = 2 Query: 110 YLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + AF +L Sbjct: 917 YIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVVGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVLFFIAVAFISIL 1120
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_MUNMU (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus muntjak GN=CFTR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_DIDMA (Cystic fibrosis transmembrane conductance regulator OS=Didelphis marsupialis virginiana GN=CFTR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 50/211 (23.70%), Postives = 98/211 (46.45%), Query Frame = 2 Query: 89 TLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 T + + Y+ +G T F + R L V I SK L ++L S+ +APMS +++ G +L+R S D++I+D +P ++ + L V++ + + ++PVI I L+ Y+ T+++L +L ++ + HL S+ G + AF + F ++ + + +F + W R+E + F +L Sbjct: 911 TSKYYLFYIYVGIADTFFALGIFRGLPLVHTLISVSKILHHKMLYSVLKAPMSTFNTLKPGGILNRFSKDIAILDDLLPLTIFDFIQLILIVVGALIVVSAIRPYIFLATVPVIIAFIMLRAYFLQTSQQLKQLESEARTPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTASWFLYLSTLRWFQMRIELVFVIFFIAVTFISIL 1121
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 50/212 (23.58%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST +Y+ +G T + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++++ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G + AF + F A ++ + + +F + W R+E + F +L Sbjct: 910 STSSFYFLYIYVGVADTFLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSILKPYIFLATVPVIVAFVLLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFEALFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1121
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_BOVIN (Cystic fibrosis transmembrane conductance regulator OS=Bos taurus GN=CFTR PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14 Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST + Y+ +G TL + R L V I SK+L ++L S+ +APMS ++ G +L+R S D++++D +P ++ V + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_RHIFE (Cystic fibrosis transmembrane conductance regulator OS=Rhinolophus ferrumequinum GN=CFTR PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13 Identity = 53/227 (23.35%), Postives = 105/227 (46.26%), Query Frame = 2 Query: 47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 NS + N +P + ST + Y+ +G +L + R L V I SK L ++L+S+ APMS ++ G +L+R S D++I+D +P ++ + + V++++ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G + AF + F ++ + + +F + W R+E + F +L Sbjct: 895 NSTRSTNNTSPVIITSTSAFYMFYIYVGVADSLLALGFLRGLPLVHTLITVSKILHQKMLHSVLHAPMSTLNTLKAGAILNRFSKDIAILDDLLPLTIFDFIQLVLIVIGAVVVVSILKPYIFLAAVPVIIAFVILRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTATWFLYLSTLRWFQMRIEMIFVVFFVAVTFISIL 1121
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13 Identity = 58/215 (26.98%), Postives = 100/215 (46.51%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST + Y+ +G TL + R L V I SK L ++L+S+ RAPMS + G +L+R S D++I+D +P ++ V + V++V+ + ++PVI + L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 910 STSSYYLFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHRMLHSVLRAPMSTLNMLKAGGILNRFSKDIAILDDLLPLTIFDFVQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFVILRGYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVVFFIAVTFISIL 1121
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13 Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715 ST + Y+ +G TL + R L V I SK L ++L+S+ +APMS ++ G +L+R S D++I+D +P ++ + + V++V+ + ++PVI I L+ Y+ T+++L +L +S + HL S+ G + AF + F F K L+L N +F + W R+E + F +L Sbjct: 910 STSAYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEGRSPIFTHLLTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRMEIIFVIFFIAVTFISIL 1121 The following BLAST results are available for this feature:
BLAST of EY664845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664845 ID=EY664845; Name=EY664845; organism=Citrus sinensis; type=EST; length=914bpback to top |