EY664845

Overview
NameEY664845
Unique NameEY664845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 56/215 (26.05%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            +T    V Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 NTSSYYVFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVSVLQPYIFLATVPVIAAFVLLRAYFLQTSQQLKQLESAGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 56/207 (27.05%), Postives = 99/207 (47.83%), Query Frame = 2
Query:  110 YLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +        AF  +L
Sbjct:  917 YIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVVGAIAVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVLFFIAVAFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    + Y+ +G   TL  +   R L  V   I  SK+L  ++L S+ +APMS  ++   G +L+R S D++++D  +P ++   V         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_MUNMU (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus muntjak GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    + Y+ +G   TL  +   R L  V   I  SK+L  ++L S+ +APMS  ++   G +L+R S D++++D  +P ++   V         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_DIDMA (Cystic fibrosis transmembrane conductance regulator OS=Didelphis marsupialis virginiana GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 50/211 (23.70%), Postives = 98/211 (46.45%), Query Frame = 2
Query:   89 TLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            T +  + Y+ +G   T F +   R L  V   I  SK L  ++L S+ +APMS +++   G +L+R S D++I+D  +P ++   +         L V++ +   +   ++PVI   I L+ Y+  T+++L +L    ++ +  HL  S+ G   + AF  +  F       ++ + + +F   +   W   R+E +         F  +L
Sbjct:  911 TSKYYLFYIYVGIADTFFALGIFRGLPLVHTLISVSKILHHKMLYSVLKAPMSTFNTLKPGGILNRFSKDIAILDDLLPLTIFDFIQLILIVVGALIVVSAIRPYIFLATVPVIIAFIMLRAYFLQTSQQLKQLESEARTPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTASWFLYLSTLRWFQMRIELVFVIFFIAVTFISIL 1121          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 50/212 (23.58%), Postives = 99/212 (46.70%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST     +Y+ +G   T   +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++++   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F A     ++ + + +F   +   W   R+E +         F  +L
Sbjct:  910 STSSFYFLYIYVGVADTFLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSILKPYIFLATVPVIVAFVLLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFEALFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1121          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_BOVIN (Cystic fibrosis transmembrane conductance regulator OS=Bos taurus GN=CFTR PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    + Y+ +G   TL  +   R L  V   I  SK+L  ++L S+ +APMS  ++   G +L+R S D++++D  +P ++   V         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  909 STSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFVQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL 1120          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_RHIFE (Cystic fibrosis transmembrane conductance regulator OS=Rhinolophus ferrumequinum GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13
Identity = 53/227 (23.35%), Postives = 105/227 (46.26%), Query Frame = 2
Query:   47 NSWLAANVENPNV--STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRFFAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            NS  + N  +P +  ST    + Y+ +G   +L  +   R L  V   I  SK L  ++L+S+  APMS  ++   G +L+R S D++I+D  +P ++   +         + V++++   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F       ++ + + +F   +   W   R+E +         F  +L
Sbjct:  895 NSTRSTNNTSPVIITSTSAFYMFYIYVGVADSLLALGFLRGLPLVHTLITVSKILHQKMLHSVLHAPMSTLNTLKAGAILNRFSKDIAILDDLLPLTIFDFIQLVLIVIGAVVVVSILKPYIFLAAVPVIIAFVILRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTATWFLYLSTLRWFQMRIEMIFVVFFVAVTFISIL 1121          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13
Identity = 58/215 (26.98%), Postives = 100/215 (46.51%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    + Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ RAPMS  +    G +L+R S D++I+D  +P ++   V         + V++V+   +   ++PVI   + L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  910 STSSYYLFYIYVGVADTLLALGFFRGLPLVHTLITVSKILHHRMLHSVLRAPMSTLNMLKAGGILNRFSKDIAILDDLLPLTIFDFVQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFVILRGYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRIEMIFVVFFIAVTFISIL 1121          
BLAST of EY664845 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13
Identity = 57/215 (26.51%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   86 STLRLIVVYLLIGFVSTLFLMS--RSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMXIXAFEXEDRF---FAKNLDLIDTNASPFFQTFAANEWLIQRLETLSANCISLAAFCMVL 715
            ST    + Y+ +G   TL  +   R L  V   I  SK L  ++L+S+ +APMS  ++   G +L+R S D++I+D  +P ++   +         + V++V+   +   ++PVI   I L+ Y+  T+++L +L    +S +  HL  S+ G   + AF  +  F   F K L+L   N   +F   +   W   R+E +         F  +L
Sbjct:  910 STSAYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLATVPVIAAFIILRAYFLHTSQQLKQLESEGRSPIFTHLLTSLKGLWTLRAFGRQPYFETLFHKALNLHTAN---WFLYLSTLRWFQMRMEIIFVIFFIAVTFISIL 1121          
The following BLAST results are available for this feature:
BLAST of EY664845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
CFTR_CALJA7.402e-1426.05Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_RABIT9.668e-1427.05Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MUNRE9.668e-1426.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MUNMU9.668e-1426.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_DIDMA9.668e-1423.70Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_DASNO9.668e-1423.58Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_BOVIN9.668e-1426.51Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_RHIFE1.263e-1323.35Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_OTOGA1.263e-1326.98Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_CANFA1.263e-1326.51Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664845 ID=EY664845; Name=EY664845; organism=Citrus sinensis; type=EST; length=914bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGANCATT
ANGGCTTTTGAGGANGAAGATCGGTTTTTTGCAAAGAACCTTGACCTCAT
TGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGGT
TGATCCAACGCCTAGAAACACTCAGTGCAAACTGTATATCCCTCGCAGCA
TTCTGTATGGTTTTGCTTCCTNCTGGAACTTTACCCCTGGATTATTGGAA
TGGCCCNTTCTATGGTCTTTCGTTAAACAGTCCCTAGTATGTCAATCAAA
CCAGTGACTCTAGCAAATATACATTTCTGTAAAAGACTNACCATACATGC
ATGNACCAGTGAGCCCCTGAGTAGAAGAAACACCGGCCCCACCACTGGCC
CGTGTGGGAAAGGG
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