EY664844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 5.090e-18 Identity = 54/216 (25.00%), Postives = 112/216 (51.85%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS--AEKAYHEQLSVAEITNSAFEPSSMM--AKCDPRHGK-YMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGM 644 +LDN A+ I L I+ PT+T +N LVS ++S T +LR+ +N ++ +L+P P++HF+++ Y P++S K + +V ++ +P +MM A D + + +++ + +G+V P V+ ++ I+ ++ F+ W P + + P V ++ + M++N T ++ +F R ++D + + AF+ + E M Sbjct: 204 VLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESM 414
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17 Identity = 52/221 (23.53%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHE------QLSVAEITNSAFEPSSMMAKC-----DPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYA----KRAFVHWY 629 +LDN A+ I L + +P +N L++ V+++ T +LR+ G +N D+ +L+P PR HF+++ Y P ++AE A + + +V ++ +P ++M D + KY++ + +G+V P V+ ++ I+ ++ F++W P + ++ + P V ++ + M++N TSV +F+++ ++ + ++AF+ Y Sbjct: 204 VLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTP-LTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKSRDIANAKYISILNIIQGEVDPSQVHKSLQRIRERKQANFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLANHTSVRHLFNKVLRDYEKLMGPKQERQAFMQAY 418
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17 Identity = 57/208 (27.40%), Postives = 102/208 (49.04%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS----AEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVH 623 L DN+A+ ++ R L +Y N+L++ V+SS+T SLRF + + + LVP P +HF+ S+ P S K + ++LS ++ F+ ++ M D Y+A +G V DV A+ +KT++ I+F W PT + + P + M++N++S+ VF + FD+++ + AF+H Sbjct: 204 LFDNDALLNLTARVLRDSNTSYQQTNQLIASVMSSVTNSLRFPSYMYNSLPSIFSTLVPTPELHFLAPSFTPFTSDFVPGAKDF-KRLSAYDVILDLFDKNNSMVTRDTDTPVYLAIYDALQGAVEQSDVTRAI--LKTQQRIKFAPWSPTSLHVNLGRKSPY---NSSANSDYVSGMMLANTSSIVSVFQKTVSSFDVIFKRGAFLH 405
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17 Identity = 50/208 (24.04%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWY 629 +LDN AI I L + PT + +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ ++ + +V ++ + ++M + G YM+ + +GDV P V+ ++ I+ + F+ W P + ++ + P + ++ + M++N T + +F + ++ + AF+ Y Sbjct: 201 VLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIMTSGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERNVANFIPWGPASIQVALSKKSPYIESDNKVSGL-----MLANHTGIRSIFQVLYGQYRQFRKRDAFLGTY 403
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.174e-12 Identity = 50/209 (23.92%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS---AEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWY 629 + DN ++ +I + + N+L+S +ISS+T S+RF + ++ + L+P P +HF+ S+ P S + H+ S ++ +PS+ + + Y G+V P+ ++ A+ K ++ I+F W + I + P + + +V + M+SN ++V +VF + FD ++AK AF++ Y Sbjct: 203 VFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKGHSSYDVMLDLLDPSNSLVSTAMNNPTYFNVYNTIIGNVEPRQISRAMT--KLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEV--SGMMLSNMSTVVNVFENACNTFDKVFAKGAFLNNY 407
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.705e-11 Identity = 54/219 (24.66%), Postives = 99/219 (45.21%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA-YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL-MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF-----KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGME 647 ++DN ++ SL I PT+ ++N L+S V+++ T+++RF G + LVP + F++ SY P + E + + + +++ P + +A + + + L + G +V+ V K + FV W P F KC N P+ V G ++NST + + S+I +FD + +RAF+ Y G+E Sbjct: 197 VMDNSSLGRYTLDSLRIGTPTFDHINLLISTVMAASTSTIRFPGYMYCTHQSINNCLVPLDPLKFVVPSYTPFVCDEMSRVVRKATCSDVMRRLLLPKTRLAGYEQTKAQSVVSMLNILHGVEDSGEVSRTVMRFLDKGMVNFVPWMPPSFNVALGKCIANETRPSRVSG----------LSLTNSTGASLILSKISGQFDKLRKQRAFLDIYKRFGVE 405 The following BLAST results are available for this feature:
BLAST of EY664844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 416
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664844 ID=EY664844; Name=EY664844; organism=Citrus sinensis; type=EST; length=935bpback to top |