EY664844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 2.417e-113 Identity = 187/213 (87.79%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 +LDNEAIYD+ R +LDIERPTYTNLNRL+ QV+S+LTASLRFDGALNVD+TEFQTNLVPYPRIHF+L++YAPVISAEKAYHEQLSV+EI+N+ FEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMI+NST++A+VF+RIDHKFDLMY+KRAFVHWYVGEGMEE Sbjct: 203 MLDNEAIYDLTRANLDIERPTYTNLNRLIGQVVSALTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTTYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 2.417e-113 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 4.115e-113 Identity = 185/213 (86.85%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T+VA+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 4.115e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 5.370e-113 Identity = 184/213 (86.38%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T+VA+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 5.370e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 7.006e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 7.006e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 7.006e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 7.006e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 9.141e-113 Identity = 183/213 (85.92%), Postives = 206/213 (96.71%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 9.141e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 9.141e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 9.141e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 9.141e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 9.141e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 399.823 bits (1026), Expect = 9.141e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 9.141e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 9.141e-113 Identity = 183/213 (85.92%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 9.141e-113 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435 The following BLAST results are available for this feature:
BLAST of EY664844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 416
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664844 ID=EY664844; Name=EY664844; organism=Citrus sinensis; type=EST; length=935bpback to top |