EY664844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 3.457e-112 Identity = 182/213 (85.45%), Postives = 206/213 (96.71%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 3.457e-112 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 397.897 bits (1021), Expect = 3.457e-112 Identity = 182/213 (85.45%), Postives = 206/213 (96.71%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 3.457e-112 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA2_PATVU (Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 4.511e-112 Identity = 180/213 (84.51%), Postives = 206/213 (96.71%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VAEITN+ FEP++ M KCDPRHGKYM+CC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 4.511e-112 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2) HSP 1 Score: 397.512 bits (1020), Expect = 4.511e-112 Identity = 181/213 (84.98%), Postives = 207/213 (97.18%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQL+VA+ITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 4.511e-112 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA3_BOVIN (Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 4.511e-112 Identity = 181/213 (84.98%), Postives = 205/213 (96.24%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHK DLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKLDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 4.511e-112 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 5.886e-112 Identity = 180/213 (84.51%), Postives = 206/213 (96.71%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERP+YTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ + KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 5.886e-112 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA1A_PIG (Tubulin alpha-1A chain OS=Sus scrofa GN=TUBA1A PE=1 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 7.680e-112 Identity = 181/213 (84.98%), Postives = 205/213 (96.24%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPR HF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY+PPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 7.680e-112 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 7.680e-112 Identity = 181/213 (84.98%), Postives = 205/213 (96.24%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKRTIQFVDWCPTGFK GINYQPPT VPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 29.261 bits (64), Expect = 7.680e-112 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEARED+AALE EV Sbjct: 414 EEGEFSEAREDMAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 7.680e-112 Identity = 181/213 (84.98%), Postives = 204/213 (95.77%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHE LSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 7.680e-112 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
BLAST of EY664844 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 7.680e-112 Identity = 181/213 (84.98%), Postives = 204/213 (95.77%), Query Frame = 3 Query: 12 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 650 ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKAYHEQLSVAEIT+S FEP+S M KCDPRHGKYMACC++YRGDVVPKDVN A+A IKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++A+ ++R+DHKFDLMYAKRAFVHWYVGEGMEE Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415 HSP 2 Score: 30.0314 bits (66), Expect = 7.680e-112 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 646 KKXEFSEAREDLAALEXIMREV 711 ++ EFSEAREDLAALE EV Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435 The following BLAST results are available for this feature:
BLAST of EY664844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 416
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664844 ID=EY664844; Name=EY664844; organism=Citrus sinensis; type=EST; length=935bpback to top |