EY664839

Overview
NameEY664839
Unique NameEY664839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664839_ssr65 microsatellite EY664839_ssr65:65..94. BLAST: Citrus ESTs to Prunus persica proteins V1
EY664839_ssr99 microsatellite EY664839_ssr99:99..119. BLAST: Citrus ESTs to Prunus persica proteins V1
EY664839_ssr170 microsatellite EY664839_ssr170:170..181. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7970 contig Csv1_Contig7970:1..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  220 SEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDN--RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELV 624
            S+   L A+R    D D   +  DP +  P  W  + C+  +  RVT++ L   NL G + P +  +E L  L L  N + GT+P ++  L +L  + L NN +SG +PP LA L +L  L + +N   G+IP  L+
Sbjct:  373 SDVSVLDAIRSMSPDSDWASEGGDPCI--PVLWSWVNCSSTSPPRVTKIALSRKNLRGEIPPGINYMEALTELWLDDNELTGTLP-DMSKLVNLKIMHLENNQLSGSLPPYLAHLPNLQELSIENNSFKGKIPSALL 506          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  358 LDLGNSNLSGRLVPEL-GKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKS---LVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 684
            L+LGN+ LSG  +  +  KL  +  L L  NNI G++P+ L N  +L  LDL +N  +G++P     L+S   L  L + +N L+G +P EL    SLK +D+S N L G IP
Sbjct:  331 LNLGNNKLSGDFLSTVVSKLSRITNLYLPFNNISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIP 443          

HSP 2 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  331 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL 639
            C     +  L L N+ L+G L   + K  ++ ++ L  N + G IPV +G L+ L  L L NN+++G IP  L   K+L++L LN N LTG +P EL   + L
Sbjct:  471 CVDGGNLETLILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGL 573          

HSP 3 Score: 68.9366 bits (167), Expect = 4.324e-11
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  427 YLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEKYPRLEGPEL 756
            YL+L  N + G+IP+  G +  L  L+L +N ++G IP S   LK++  L L+ N L G +P  L G+S L  +DVS+N+L G IP  G     PL  +     L G  L
Sbjct:  643 YLDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCGVPL 752          

HSP 4 Score: 68.5514 bits (166), Expect = 5.647e-11
Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  343 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKS---LISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-----GPFEHIPLNN 720
            +R+T L L  +N+SG +   L    +L+ L+L  N   G +P    +L+S   L  L + NN +SG +P  L K KSL  + L+ N LTG IP+E+  +  L  + + +N+L G IP S     G  E + LNN
Sbjct:  351 SRITNLYLPFNNISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICVDGGNLETLILNN 484          

HSP 5 Score: 68.5514 bits (166), Expect = 5.647e-11
Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 1
Query:  358 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIP----VELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 687
            +DL  + L+G +  E+  L  L  L ++ NN+ G IP    V+ GNL++LI   L NN ++G +P S++K  +++++ L+ N LTG+IP  +  +  L ++ + +N L G IP+
Sbjct:  431 IDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICVDGGNLETLI---LNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPS 541          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  250 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 687
            +S +D DN L        + C W  + C Q  R+ RL L    L G      L +L+ L+ L L  N++ G IP +L +L +L SL L  N  SG  PPS+  L  L+ L ++ N  +G IP E+  +  L  +++  N   GT+P+
Sbjct:   42 KSTADLDNKLLYSLTERYDYCQWRGVKCAQ-GRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPS 186          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  358 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 690
            L +  + LSG   P+LG++  L  + +  N   G +P  LGNL+SL  L + +NNI+G+IP SL+ LK+L   R++ N L+G+IP  +   + L  +D+    + G IP S
Sbjct:  140 LAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPAS 250          

HSP 2 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  346 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPV-----------------------ELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 684
            RVT + L   NL G + PE G L  L  ++L  N + GTIP                        +LG + +L  + + +N  +G++PP+L  L+SL  L ++ N +TG+IP  L  + +L    +  N L G IP
Sbjct:   89 RVTNIQLRGFNLRGIIPPEFGNLTRLTEIDLVLNFLSGTIPTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIP 224          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  328 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 684
            T  + +++  LDL  + ++  L  +L  L  L+ L L  N I   +P  +GN  SL +LDL  N+ISGKIP +++ L +L  L+L++N     +P ELV   SL  +D+SSN L  ++P
Sbjct:   85 TIGKMSKLQTLDLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP 202          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 1
Query:  307 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 684
            PCTW  + C +  RVT L L    LSG L   +G L  L+ L    N + G +P +  NL  L  L L  N  SG+IP  L  L +++ + L  N   G+IP  +   + L  + +  N L G IP
Sbjct:   52 PCTWGGVQC-ESGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIP 176          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 1
Query:  349 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEKYPRLEG 747
            +T L LG+ +     +  +  ++ L  L L  NN+ GTIP  +G   SL  +DL  N + G IP SL  L  L  L L +N L G  P +     SL+ VDVS NDL G++P+      + LN       LEG
Sbjct:  269 LTELRLGDISSGSSSLDFIKDMKSLSVLVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNNTLNGSFPTQKT--QSLRNVDVSYNDLSGSLPSWVSLPSLKLNLVANNFTLEG 399          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 1
Query:  217 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEKYPRLEGPELLG---LCSYDTN---CXITIDCCLSST 819
            NS+  AL A   S+  P     +W+ T     +W  +TC  D   V  L L    L G + P  LGKLE L+ L L  N + G +P ++ +L SL  + L +NN SG++P  ++  + L  L L+ N  TG+IP     +  L  + + +N L G +P         LN    +     P  LG     S+  N   C + +  C +S+
Sbjct:   46 NSDRQALLAFAASV--PHLRRLNWNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPNLDTVSLRRLNLSNNHLNGSIPSALGGFPSSSFSGNTLLCGLPLQPCATSS 250          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 1
Query:  253 SLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR----------------VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHI 708
            SL+DP      W     +P T   I  N D R                +  L L  ++ SGR+VP LG +  LQ+L+L  N   G IP  +  L SL  L+L +N   G  P     L+ L  L L+ N + G +      + +++ VD+S N   G +  S P E+I
Sbjct:   53 SLTDPSTCPNDWPGISCDPETGSIIAINLDRRGLSGELKFSTLSGLTRLRNLSLSGNSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNGGL--SLPMENI 218          

HSP 2 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 52/176 (29.55%), Postives = 89/176 (50.57%), Query Frame = 1
Query:  358 LDLGNSNLSGRL---------VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEKYPRLEGPELLGLCSYDTNCXITIDCCLSSTXVSIDVSAKIESV 858
            L+L  +NL G +         +  L     ++ L+L  N++ G +P ++G ++ +  L+L NN +SG++P  L KL  L+FL L++N   GQIP +L   S +   +VS NDL G IP        P ++F  YP      L G    D++  +++      + +SI ++  + SV
Sbjct:  440 LNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLP--SQMVGFNVSYNDLSGIIPED--LRSYPPSSF--YPGNSKLSLPGRIPADSSGDLSLPGKKHHSKLSIRIAIIVASV 609          
BLAST of EY664839 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 1
Query:  328 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 684
            T  + +++  LDL N+ +S  L  +   L  L+ L L  N I G+    +GN   L  LD+  NN SG IP ++  L SL  L+L+ N     IPR L+G  SL  +D+SSN L G++P
Sbjct:   87 TIGKLSKLQSLDLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP 204          
The following BLAST results are available for this feature:
BLAST of EY664839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
Y1677_ARATH2.293e-1233.58Probable LRR receptor-like serine/threonine-protei... [more]
BRL3_ARATH2.293e-1239.82Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5720_ARATH3.911e-1233.33Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y5344_ARATH3.911e-1236.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5815_ARATH5.107e-1236.97Probably inactive leucine-rich repeat receptor-lik... [more]
Y5659_ARATH5.107e-1234.92Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y1561_ARATH5.107e-1236.09Probable LRR receptor-like serine/threonine-protei... [more]
Y5830_ARATH6.670e-1229.67Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y5020_ARATH6.670e-1230.36Probable inactive receptor kinase At5g10020 OS=Ara... [more]
Y2242_ARATH6.670e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664839 ID=EY664839; Name=EY664839; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGCTCTCTGATATTCCCAAAGCCGATCCTCTTTCTCTTTGA
CAAACACAAACCCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCATGG
CGGCGGCGGCGGCGGCGGCGGAAGCGGCAGTGCAGTGGTTGAGTGTGTGT
ATAACGTTCAGCATAAGCCTAATAATAATAATAGGGAGCAGCAGCTTGGT
GGCGGTGGCGAGTGGAAACTCGGAAGGGGACGCGCTGTACGCGCTCAGGA
GAAGCTTATCAGATCCCGATAACGTGCTTCAGAGCTGGGATCCAACTCTC
GTCAATCCCTGCACTTGGTTTCACATAACCTGTAATCAGGACAACCGCGT
TACTCGACTGGATTTGGGTAATTCAAATCTATCCGGCCGTCTCGTCCCTG
AACTGGGCAAGCTCGAGCATTTGCAATACCTGGAACTTTACAAAAACAAC
ATCCAAGGAACTATCCCTGTCGAGCTCGGTAACTTGAAGAGCCTCATCAG
CTTGGACTTGTATAATAACAACATCTCGGGGAAAATCCCTCCTTCCTTGG
CTAAATTGAAATCTCTTGTTTTTTTGCGGCTTAACGATAATCGGCTAACT
GGACAAATTCCCAGGGAACTTGTTGGAATTTCAAGTCTCAAAGTTGTGGA
TGTTTCAAGCAATGATCTGTGTGGAACAATTCCTACAAGCGGACCATTTG
AACACATCCCACTCAACAACTTTGAGAAATACCCTCGATTAGAAGGTCCA
GAGTTGCTGGGACTTTGCAGTTATGACACAAACTGCNTCATAACGATTGA
TTGTTGCTTAAGCTCTACTCANGTTTCGATAGATGTGTCCGCGAAGATCG
AAAGCGTCTTTACCTAAAGCGTANTGTATTGGGTGAAAGAACC
back to top