CX672515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13 Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = -2 Query: 320 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICL---DILKEQWSPALTISKVLLSICSLLTDPNP 655 KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP+KPP + T + + +ICL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.820e-13 Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = -2 Query: 263 DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 541 DS YAG + + FP YP +PP + F +K+FHPNI +G++C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 77 DSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12 Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = -2 Query: 347 SKRILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGRICLDIL-------KEQWSPALTISKVLLSI 658 +KRI KEL + P + S D+ + I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G+ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDII--KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12 Identity = 39/142 (27.46%), Postives = 70/142 (49.30%), Query Frame = -2 Query: 245 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARS 661 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N R+CL D + W+PA ++S +L + S + + P + + SD K + A+S Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKG------PTLGSIETSDFTKKQLAAQS 146
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12 Identity = 39/142 (27.46%), Postives = 70/142 (49.30%), Query Frame = -2 Query: 245 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARS 661 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N R+CL D + W+PA ++S +L + S + + P + + SD K + A+S Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKG------PTLGSIETSDFTKRQLAAQS 146
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11 Identity = 34/117 (29.06%), Postives = 61/117 (52.14%), Query Frame = -2 Query: 320 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICL---DILKEQWSPALTISKVLLSICSLLTDPNP 661 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N R+CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11 Identity = 43/136 (31.62%), Postives = 63/136 (46.32%), Query Frame = -2 Query: 230 PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKY 616 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +G ICL IL++ W P ++ V+ + SL D + +D L + A M+ ++ + R + +Y Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179 The following BLAST results are available for this feature:
BLAST of CX672515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672515 ID=CX672515; Name=CX672515; organism=Citrus sinensis; type=EST; length=815bpback to top |