CX672515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.846e-35 Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KS++A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.846e-35 Identity = 71/143 (49.65%), Postives = 97/143 (67.83%), Query Frame = -2 Query: 227 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 655 KRI+KE + L +P SA P ++ +++ I GP DSP+ GGVF + + DYP PKV F TK++HPNI+ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++ + A AR WT+ YA Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ GRICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++A+ TAR+WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35 Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = -2 Query: 263 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 661 A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP KPP V F +++FHPNI ++G ICLDIL+ QWSP ++ VL SI SLL DPNPD P E A ++ +K +Y Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREY 137
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.412e-34 Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 224 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 655 KRI+KE++ L +DPP A P +++ +++ T+ GP S Y GG F + + P +YP PP V F TK++HPN++ GRICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + A AR WT+KYA+ Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.366e-34 Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = -2 Query: 227 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 655 KRI+KE + L DP +A P +++ ++Q TI GP SPY G+F + ++ P DYP + PKV F TK++HPNI+ GRICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + ++ +A AR WT+ YA Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.009e-34 Identity = 69/149 (46.31%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 239 SIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----EATARSWT 670 S A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP KPP V F +++FHPNI ++G ICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY +K +Y E +SWT Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150 The following BLAST results are available for this feature:
BLAST of CX672515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672515 ID=CX672515; Name=CX672515; organism=Citrus sinensis; type=EST; length=815bpback to top |