EY664838

Overview
NameEY664838
Unique NameEY664838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING3_RAT (Inhibitor of growth protein 3 OS=Rattus norvegicus GN=Ing3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  391 ELDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRRKGR 591
            ++D   DPNEP YC+CNQVSYGEMV CDN +C IEWFH+GCVGL E PKGKW+CP C A   RR  R
Sbjct:  353 QVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCTAAMKRRGSR 419          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING3_MOUSE (Inhibitor of growth protein 3 OS=Mus musculus GN=Ing3 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  391 ELDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRRKGR 591
            ++D   DPNEP YC+CNQVSYGEMV CDN +C IEWFH+GCVGL E PKGKW+CP C A   RR  R
Sbjct:  353 QVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCTAAMKRRGSR 419          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING1_MOUSE (Inhibitor of growth protein 1 OS=Mus musculus GN=Ing1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 1
Query:  397 DLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDC 561
            DLP+DPNEPTYC+CNQVSYGEM+ CDN  C IEWFHF CVGL  +PKGKWYCP C
Sbjct:  202 DLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING1_HUMAN (Inhibitor of growth protein 1 OS=Homo sapiens GN=ING1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 1
Query:  397 DLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDC 561
            DLP+DPNEPTYC+CNQVSYGEM+ CDN  C IEWFHF CVGL  +PKGKWYCP C
Sbjct:  345 DLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 399          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING4_BOVIN (Inhibitor of growth protein 4 OS=Bos taurus GN=ING4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 1
Query:  394 LDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRR 582
            LD+PVDPNEPTYC+C+QVSYGEM+ CDNP+C IE FHF CVGL  +P+GKW+CP C+  + ++
Sbjct:  186 LDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIERFHFACVGLTTKPRGKWFCPRCSQERKKK 248          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING2_MOUSE (Inhibitor of growth protein 2 OS=Mus musculus GN=Ing2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.678e-22
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 1
Query:  394 LDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDC 561
            ++  +DPNEPTYC+CNQVSYGEM+ CDN  C IEWFHF CV L  +PKGKWYCP C
Sbjct:  204 VEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKC 259          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: ING2_HUMAN (Inhibitor of growth protein 2 OS=Homo sapiens GN=ING2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.678e-22
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 1
Query:  394 LDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDC 561
            ++  +DPNEPTYC+CNQVSYGEM+ CDN  C IEWFHF CV L  +PKGKWYCP C
Sbjct:  203 VEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKC 258          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: YNG2_ASHGO (Chromatin modification-related protein YNG2 OS=Ashbya gossypii GN=YNG2 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query:  409 DPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDC----AALKNRRKGR 591
            + ++  YC C  VSYGEMVACD PNCK EWFH+GCV L E PKG+WYCP+C    A LK ++K R
Sbjct:  220 EDDKQLYCFCQSVSYGEMVACDGPNCKYEWFHYGCVNLDEPPKGQWYCPECRQEMANLKLKKKKR 284          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: YNG1_YEAST (Protein YNG1 OS=Saccharomyces cerevisiae GN=YNG1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 1
Query:  418 EPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYC-PDCAALKNRR 582
            E  YC C  VSYG MVACDNP C  EWFH+GCVGLK+ PKGKWYC  DC  + N+R
Sbjct:  154 EEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEIANQR 209          
BLAST of EY664838 vs. ExPASy Swiss-Prot
Match: YNG2_YEAST (Chromatin modification-related protein YNG2 OS=Saccharomyces cerevisiae GN=YNG2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 1
Query:  409 DPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRRK 585
            + ++  YC C +VS+GEMVACD PNCK EWFH+ CV LKE PKG WYCP+C     + K
Sbjct:  218 EEDKTLYCFCQRVSFGEMVACDGPNCKYEWFHYDCVNLKEPPKGTWYCPECKIEMEKNK 276          
The following BLAST results are available for this feature:
BLAST of EY664838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ING3_RAT1.101e-2467.16Inhibitor of growth protein 3 OS=Rattus norvegicus... [more]
ING3_MOUSE1.101e-2467.16Inhibitor of growth protein 3 OS=Mus musculus GN=I... [more]
ING1_MOUSE1.101e-2478.18Inhibitor of growth protein 1 OS=Mus musculus GN=I... [more]
ING1_HUMAN1.101e-2478.18Inhibitor of growth protein 1 OS=Homo sapiens GN=I... [more]
ING4_BOVIN3.541e-2365.08Inhibitor of growth protein 4 OS=Bos taurus GN=ING... [more]
ING2_MOUSE6.678e-2269.64Inhibitor of growth protein 2 OS=Mus musculus GN=I... [more]
ING2_HUMAN6.678e-2269.64Inhibitor of growth protein 2 OS=Homo sapiens GN=I... [more]
YNG2_ASHGO9.026e-1960.00Chromatin modification-related protein YNG2 OS=Ash... [more]
YNG1_YEAST5.850e-1866.07Protein YNG1 OS=Saccharomyces cerevisiae GN=YNG1 P... [more]
YNG2_YEAST1.303e-1757.63Chromatin modification-related protein YNG2 OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664838 ID=EY664838; Name=EY664838; organism=Citrus sinensis; type=EST; length=858bp
CTTATGCGGGAAATTAGGGCTGGGAATATTACTCCAAATACTTCACTTAT
CAGATTCTCCGATGATGCCCTTGATGAGCAAAAGCATAGCATCAGGATTG
CAGATGAAAAGGTTGCCTTGGCTGTTCAGGCTTATGATTTGGTAGATACC
CACATACAGCAACTAGATCAATATCTGAAGAATTTCGATGAAGAGCTTCG
ACGTGAAAGAGATAGTGTTGCTACAACTGCATCACCTGCTCCAAGTCTCG
ATGGTAGCACAAAATCCGGAAGGAGCAGTGAGGGTGGTAGAGGAGGGCGT
AAAAAAACACGCCTGGCAACAGCAGCAGCCGCTGCAGCAGCGGCAGTGAC
AGAAGCAGCAGCAACACCAGTTGCAAATCCTACTGGTATGGAGTTAGATT
TACCCGTGGATCCAAATGAACCCACATACTGTGTCTGCAACCAAGTCAGC
TATGGAGAGATGGTTGCATGCGATAACCCCAACTGCAAGATAGAATGGTT
CCACTTTGGCTGTGTTGGTTTGAAAGAACAGCCTAAAGGGAAATGGTATT
GTCCAGACTGTGCAGCTTTGAAAAACCGTCGCAAAGGCAGATGATGCCTG
ACTATTCCATATGCATTTGTACATCCTAGATGTGAAAATAAAACGTGTTA
CAGGAACTATGTTTGTTTTGTTAACCAACTCATGATGTAGGATGATGCAT
CTCTTTTGTTTCTAGCTATTTAGTGTGTGATTCATGGTAAATCTGTCAGG
CTAACTATTTAATGATTTAGGACTCATCTGCTTTTCTGGTACTATGATGT
CGCTGGTGAAATGATGCACCCCATTATATGAAAAAAAAAAAAAGGGCGNC
GCTCTAAA
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