CX672506

Overview
NameCX672506
Unique NameCX672506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_WOLTR (Guanylate kinase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=gmk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 49/122 (40.16%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            +++V+S PSG GK T++++L E   +L   V+ T+R  RPGE+NGKDYFFV+K+EF ++ +  ++LEYA V+ ++ GIPK  I + ++ G  ++L +D QGA  L  ++ +  + VF+   S
Sbjct:    8 VLLVLSSPSGAGKTTILERLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPS 129          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_NOVAD (Guanylate kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=gmk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            L+ ++S PSG GK T+ +KL      +   V+ T+RPMRPGEV+GKDYFFV   EF +MV+ NE  E+A V+G+  G PK  IRE +  G D++  +D QG + L +      V VF+   S
Sbjct:   21 LMFILSSPSGAGKTTIARKLLSEDSEIAMSVSVTTRPMRPGEVDGKDYFFVEPAEFERMVEANEFYEWATVFGNCYGTPKAHIRERLKTGGDVLFDIDWQGTQQLYQKAQADVVRVFILPPS 142          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_MYCTU (Guanylate kinase OS=Mycobacterium tuberculosis GN=gmk PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  348 SLGHAFDSNPVC---PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDY--KGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            S+G   D+ P     P     ++V+SGPS VGK TV++ LRE   +LHF V+AT+R  RPGEV+G DY F+    F Q++D+ ELLE+A ++G     G   + +R   A G  +++ VD+ GAR +++ + + AV VFLA  S
Sbjct:    2 SVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPE-AVTVFLAPPS 144          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_MYCBO (Guanylate kinase OS=Mycobacterium bovis GN=gmk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  348 SLGHAFDSNPVC---PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDY--KGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            S+G   D+ P     P     ++V+SGPS VGK TV++ LRE   +LHF V+AT+R  RPGEV+G DY F+    F Q++D+ ELLE+A ++G     G   + +R   A G  +++ VD+ GAR +++ + + AV VFLA  S
Sbjct:    2 SVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPE-AVTVFLAPPS 144          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_LACJO (Guanylate kinase OS=Lactobacillus johnsonii GN=gmk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 51/119 (42.86%), Postives = 82/119 (68.91%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            L++V+SGPSGVGK TV   + ++   S  + V+ T+R  RPGEVNGKDY+FVS++ F + +  NELLEY    G++ G P   +++ + +G D++L +D+ GA+ +R+++ D  VF+FL
Sbjct:    6 LLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVNGKDYYFVSEDRFQEAIKGNELLEYNEYVGNHYGTPLAPVQKMLNEGKDVLLEIDVNGAKQVRKLMPD-GVFIFL 123          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_THEFY (Guanylate kinase OS=Thermobifida fusca (strain YX) GN=gmk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.626e-22
Identity = 54/121 (44.63%), Postives = 80/121 (66.12%), Query Frame = 3
Query:  402 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            + V+SGPSGVGK TV+K+LR  R  +   V+ T+RP RPGE +G +Y+FV   EF ++V +NELLE+A   G+  G P++ + + +A G  ++L +D+ GAR +R  + D A  VFLA  S
Sbjct:   15 LTVLSGPSGVGKSTVVKELRRRRPEVWLSVSVTTRPPRPGETDGVEYYFVDDAEFDRLVAENELLEWAEFAGNRYGTPREPVLKRLAAGQPVLLEIDLNGARQVRANMPD-AFLVFLAPPS 134          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_STRAW (Guanylate kinase OS=Streptomyces avermitilis GN=gmk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.626e-22
Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  369 SNPVCPPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            ++PV P   P + V+SGPSGVGK TV+  +R+    +   V+AT+R  RPGE +G  YFFVS +E  +++   ELLE+A   G+  G P++ + E + +G  ++L +D+QGAR +R  + + A+ VFLA  S
Sbjct:    8 TSPVPPDARPRLTVLSGPSGVGKSTVVAHMRKEHPEVWLSVSATTRKPRPGEKHGVHYFFVSDDEMDKLIANGELLEWAEFAGNRYGTPRQAVLERLERGEPVLLEIDLQGARQVRESMPE-ALLVFLAPPS 138          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_ONYPE (Guanylate kinase OS=Onion yellows phytoplasma GN=gmk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.347e-22
Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRE-SRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            L+IV+SGPSGVGK TV K L E +  +  + V+AT+R  RPGE +GKDY F++KEEF + ++ N  LE+A     Y G PKKQI++++ +G ++ L ++++GA  LR+    + VF+FL
Sbjct:    8 LLIVLSGPSGVGKATVRKALFEMTNHNFVYSVSATTRKPRPGEQDGKDYHFLTKEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEVFLEIEVEGATHLRKKRIPNTVFIFL 126          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_BACSK (Guanylate kinase OS=Bacillus clausii (strain KSM-K16) GN=gmk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.347e-22
Identity = 52/122 (42.62%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            L+IV+SGP+GVGK TV   LR    ++ + V+AT+R  R GE +G +YFF ++E+F QM++  +LLE+A   G+Y G P   ++E +  G DI+L +++QGA+ +R +  +  VF+FLA  S
Sbjct:    7 LLIVLSGPAGVGKGTVCGALRNQNTAIEYSVSATTRKPREGEKHGVNYFFKTREQFEQMIEDGKLLEWAEYVGNYYGTPIDYVQETINAGKDIILEIEVQGAQKVRTVFPE-GVFIFLAPPS 127          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_AYWBP (Guanylate kinase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=gmk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.347e-22
Identity = 53/119 (44.54%), Postives = 82/119 (68.91%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRE-SRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            L+I++SGPSGVGK TV K L E +  +  + V+AT+R  RPGE +GKDY F++KEEF + ++ N  LE+A     Y G PKKQI++++ +G ++ L ++++GA  LR+    + VF+FL
Sbjct:    8 LLIILSGPSGVGKATVRKALFEMTNHNFVYSVSATTRKPRPGEQDGKDYHFLTKEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEVFLEIEVEGATHLRKKRMPNTVFIFL 126          
The following BLAST results are available for this feature:
BLAST of CX672506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
KGUA_WOLTR4.307e-2240.16Guanylate kinase OS=Wolbachia sp. subsp. Brugia ma... [more]
KGUA_NOVAD4.307e-2243.44Guanylate kinase OS=Novosphingobium aromaticivoran... [more]
KGUA_MYCTU4.307e-2240.97Guanylate kinase OS=Mycobacterium tuberculosis GN=... [more]
KGUA_MYCBO4.307e-2240.97Guanylate kinase OS=Mycobacterium bovis GN=gmk PE=... [more]
KGUA_LACJO4.307e-2242.86Guanylate kinase OS=Lactobacillus johnsonii GN=gmk... [more]
KGUA_THEFY5.626e-2244.63Guanylate kinase OS=Thermobifida fusca (strain YX)... [more]
KGUA_STRAW5.626e-2240.91Guanylate kinase OS=Streptomyces avermitilis GN=gm... [more]
KGUA_ONYPE7.347e-2245.38Guanylate kinase OS=Onion yellows phytoplasma GN=g... [more]
KGUA_BACSK7.347e-2242.62Guanylate kinase OS=Bacillus clausii (strain KSM-K... [more]
KGUA_AYWBP7.347e-2244.54Guanylate kinase OS=Aster yellows witches'-broom p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D06-G11-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672506 ID=CX672506; Name=CX672506; organism=Citrus sinensis; type=EST; length=772bp
CACAAAACGAAAACGGAAGAGAAGAGCAGAATCTCCTAAATTAACCGGAT
CTGCAAGTCTGCAACAAAACCCATAATCGTTTCTCTATTTGTGATCCCAA
CAGTACGCCCAATCTTCTCCTGATGTTTCGTCGACTCTCCACTTCGTTTT
CTCTCTACATCATCTCAAAACCCAAGTCCCCATTTGCCCTCCAAAGAAAC
CCCATTAAAAGTGAAAAACAATATCAAAGATTCCATCACTCTCTGTCTTT
AACTCCAACGTCGCTTGTTTTTTCATCAAACATCAGAATGAATCATACCC
AGGCCGCCCCTGTTAACAAAATTGAGCTTTTACGGTCGCTTGAAGCTTCA
TTGGGTCATGCCTTTGATTCAAATCCGGTTTGTCCTCCTCCCAATCCTTT
GATAATTGTAATTAGTGGTCCAAGTGGGGTTGGCAAAGATACTGTTATAA
AGAAGCTGAGGGAATCTCGTGATTCTCTTCATTTTGTTGTCACTGCTACT
AGCAGGCCAATGCGGCCTGGTGAAGTGAATGGGAAAGATTATTTCTTTGT
GTCAAAGGAGGAGTTTTTACAAATGGTTGATAAAAATGAGCTGTTGGAAT
ATGCATTAGTGTATGGGGATTACAAGGGGATTCCAAAGAAGCAAATTAGG
GAGTACATGGCGAAAGGGTATGATATTGTGTTGAGAGTGGACATTCAGGG
AGCTCGGACTTTGAGGAGGATTTTGGGGGACTCGGCAGTGTTTGTGTTTC
TGGCAGCAGAGAGTGAGATGGC
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