CX672506

Overview
NameCX672506
Unique NameCX672506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_DICDI (Guanylate kinase OS=Dictyostelium discoideum GN=guk1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 3
Query:  405 IVISGPSGVGKDTVIKKLR-ESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRR 719
            I+I+GPSGVGK T+I KLR E   S   +V+ T+R  R GE+NG  Y F       + +   + +E+A V+G++ G  KK +++   K    +L +D+QG  ++++
Sbjct:   12 IIITGPSGVGKGTLIDKLRKEYEGSFGHIVSHTTRKPREGEINGVHYHFTDIPTMTEGIKNGDFIEHANVHGNFYGTSKKALKDVSDKNKICILDIDVQGCESVKK 117          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_MYCMO (Guanylate kinase OS=Mycoplasma mobile GN=gmk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 3
Query:  402 IIVISGPSGVGKDTVIKKLRESRD-SLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGA 704
            II++SGPSGVGK ++ K L E     L F  + TSR  R  E+ GKDYFF S+EEF +++ + + +E++    +Y G  K ++ + +   +++++ ++  GA
Sbjct:   12 IIILSGPSGVGKGSIEKLLLEDEKLKLKFSTSVTSRKPRVNEIEGKDYFFRSEEEFSELIKEKKFIEWSRHLNNYYGTLKSEVDKILGAKFNVLIEIETTGA 113          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_PELUB (Guanylate kinase OS=Pelagibacter ubique GN=gmk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13
Identity = 34/106 (32.08%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLR 716
            +++++S PSG GK T++K L ++++  H  ++ T+R  R  E+  KDY+FV  ++F  ++   E LEYA V+    G  +  + E + KG +++  +D QGA  ++
Sbjct:    8 IMVILSSPSGAGKTTLVKLLSKNKN-FHISISHTTRKPRLNEIADKDYYFVDHDKFENLIKNEEFLEYAKVFNHLYGTTRTPVIEKLEKGENVIFDIDWQGADQIK 112          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_NEOSM (Guanylate kinase OS=Neorickettsia sennetsu (strain Miyayama) GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFV 746
            ++ +IS PSG GK TV   L     S+   ++ T+R  R  E +G DY+FVSK+EF +++ + E+LE+A V  +  G   + I E +A G D++  +D QGA  +R+     ++F+
Sbjct:    5 ILFIISSPSGGGKTTVADFLVGQDLSIKRSISFTTRQPRGEEKDGIDYYFVSKDEFNRLLQEGEMLEHATVLQNQYGTSHRYIEETLALGIDVLCCIDWQGAEQIRKKTNCISIFL 120          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_ANADE (Guanylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAESE 767
            L++V+S PSG GK T+  +LRE+     F ++AT+R  R  E  G DY FV+ E F ++V +    E+A V+G   G  +  + E +A G   +  +D+QG   ++      A  V +    E
Sbjct:   14 LLLVLSAPSGAGKTTLAHRLREASPDAVFSISATTRAPRGAEREGVDYHFVTAERFTELVAQGAFAEWAEVHGQRYGTLRATVDEALAAGKLALFDIDVQGGAQIKAAWPQQAATVLVLPPDE 136          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_MYCPU (Guanylate kinase OS=Mycoplasma pulmonis GN=gmk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 3
Query:  402 IIVISGPSGVGKDTVIKKLRESRD-SLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVF 743
            I+++ GPSGVGK T+ K L ES+   L    +AT+R  R GE+NG  YFF+SKEEF   ++ +E +E+   + +Y G    +I    ++G   VL V+  GA+ + +   D   F
Sbjct:    9 IVLLVGPSGVGKGTIEKILFESKTLKLSLSRSATTRKKREGEINGIHYFFISKEEFESKIENDEFMEWNEHFDNYYGTLLSEILLIFSQGRIPVLEVETYGAKKILQKYKDKKDF 123          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_BURTA (Guanylate kinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  390 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            P  L +V++ PSG GK T++  L      +   ++ T+R  R GE +G+ Y F + E+F      +E LE A V+G+Y G  +  I E M  G+D++L +D QGA+ +++    +AV +F+   S
Sbjct:   20 PGNLFMVVA-PSGAGKSTLVNALLSKDPEICLSISYTTRKPRSGEQDGQHYHFTTVEDFRARHASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDWQGAQQVKKQF-RNAVGIFILPPS 142          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_WIGBR (Guanylate kinase OS=Wigglesworthia glossinidia brevipalpis GN=gmk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 34/122 (27.87%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  411 ISGPSGVGKDTVIKKLRESRDSLHF--VVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAESEM 770
            IS PSG GK ++IK    +   ++F   ++ T+R +R  E+ GKDYFF+SKE+F +M+ + + +EY   + +Y G   K+++  +   + +   V+ +G + ++  +    + +F+   S++
Sbjct:    9 ISAPSGTGKSSLIKTFLNTNLGMNFRLSISHTTRNIRSEEIEGKDYFFISKEKFKKMIFEKKFIEYTYSFNNYYGTSFKEVKNKIKSNFSLFFDVNYKGVKKIKEFI-PKLISIFILPPSKL 129          
The following BLAST results are available for this feature:
BLAST of CX672506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
KGUA_DICDI2.798e-1335.85Guanylate kinase OS=Dictyostelium discoideum GN=gu... [more]
KGUA_MYCMO3.655e-1335.29Guanylate kinase OS=Mycoplasma mobile GN=gmk PE=3 ... [more]
KGUA_PELUB4.773e-1332.08Guanylate kinase OS=Pelagibacter ubique GN=gmk PE=... [more]
KGUA_NEOSM8.142e-1335.34Guanylate kinase OS=Neorickettsia sennetsu (strain... [more]
KGUA_ANADE1.389e-1232.52Guanylate kinase OS=Anaeromyxobacter dehalogenans ... [more]
KGUA_MYCPU1.814e-1237.39Guanylate kinase OS=Mycoplasma pulmonis GN=gmk PE=... [more]
KGUA_BURTA1.814e-1233.60Guanylate kinase OS=Burkholderia thailandensis (st... [more]
KGUA_WIGBR3.094e-1227.87Guanylate kinase OS=Wigglesworthia glossinidia bre... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D06-G11-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672506 ID=CX672506; Name=CX672506; organism=Citrus sinensis; type=EST; length=772bp
CACAAAACGAAAACGGAAGAGAAGAGCAGAATCTCCTAAATTAACCGGAT
CTGCAAGTCTGCAACAAAACCCATAATCGTTTCTCTATTTGTGATCCCAA
CAGTACGCCCAATCTTCTCCTGATGTTTCGTCGACTCTCCACTTCGTTTT
CTCTCTACATCATCTCAAAACCCAAGTCCCCATTTGCCCTCCAAAGAAAC
CCCATTAAAAGTGAAAAACAATATCAAAGATTCCATCACTCTCTGTCTTT
AACTCCAACGTCGCTTGTTTTTTCATCAAACATCAGAATGAATCATACCC
AGGCCGCCCCTGTTAACAAAATTGAGCTTTTACGGTCGCTTGAAGCTTCA
TTGGGTCATGCCTTTGATTCAAATCCGGTTTGTCCTCCTCCCAATCCTTT
GATAATTGTAATTAGTGGTCCAAGTGGGGTTGGCAAAGATACTGTTATAA
AGAAGCTGAGGGAATCTCGTGATTCTCTTCATTTTGTTGTCACTGCTACT
AGCAGGCCAATGCGGCCTGGTGAAGTGAATGGGAAAGATTATTTCTTTGT
GTCAAAGGAGGAGTTTTTACAAATGGTTGATAAAAATGAGCTGTTGGAAT
ATGCATTAGTGTATGGGGATTACAAGGGGATTCCAAAGAAGCAAATTAGG
GAGTACATGGCGAAAGGGTATGATATTGTGTTGAGAGTGGACATTCAGGG
AGCTCGGACTTTGAGGAGGATTTTGGGGGACTCGGCAGTGTTTGTGTTTC
TGGCAGCAGAGAGTGAGATGGC
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