CX672497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21 Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV+ ++G KGT+ F+ EG GPT V GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21 Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ + G GT+ F+ +G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F + K IPL+G S+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21 Identity = 62/149 (41.61%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV+ GT+ KGT+ FS EG GPTTV GS+SGL PG H +H G+ +N +STGP F P G + G L N+T +G+ I + IPL+G +S+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLAGTDV-KGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 149
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.195e-20 Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ + GT+ FS +G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I + IPL+G S+IGRG+VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.561e-20 Identity = 58/149 (38.93%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ + G GT+ F+ GPTTV G +SGL PG H +H G+ +N +STGP F PAG + G L N+ V +G +F I + IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20 Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AV V+ + KGT+ F EG GPTTV GS+SGL PG H IH G+ +N +STGP + PAG + G L N+T +G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20 Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AV V+ + KGT+ F EG GPTTV GS+SGL PG H IH G+ +N +STGP + PAG + G L N+T +G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20 Identity = 63/150 (42.00%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ + G GT+ FS E G PTTV G LSGL PG H +H G+ +N +STGP + P G D G L N+TV +G A F I K IPL G S+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 151
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20 Identity = 56/128 (43.75%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 349 V AV V++G+ G G + F+ E GPTTV G LSGL PG H +H G+ +N +STGP + PA + G L N+TV +G A F I K IPL G+ S+IGR +VVH+ P D G G Sbjct: 2 VKAVTVLSGSGGVSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPD-DLGKG 128
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20 Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 2 Query: 11 VAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V V+ + G KGT+ F+ EG+G TTV G++SGL PG H +H G+ +N +STGP F P G G L NITV +G ATF I + IPL G NS++GR +VVH+ P + + G VA G IGL Sbjct: 5 VRVLNSSEGVKGTIFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGL 150 The following BLAST results are available for this feature:
BLAST of CX672497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672497 ID=CX672497; Name=CX672497; organism=Citrus sinensis; type=EST; length=618bpback to top |