EY664828

Overview
NameEY664828
Unique NameEY664828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR10_XENTR (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus tropicalis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFA 363
            I+   ++ +   F   +GP+  I+ +EI+P  +RG   A C    W  ++++T T   +++SIGL+  F +Y VV  ++  F++  +PETKG  LE I + F+
Sbjct:  420 ITLLSMMAFVSAFSIGFGPMTWIVLSEIYPADIRGRAFAFCNSFNWAANLLITLTFLDVIASIGLSWTFLLYGVVGLLAIAFIYFFIPETKGQSLEEIDKQFS 522          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 31/98 (31.63%), Postives = 58/98 (59.18%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVI 348
            ++ A +++Y  C+  ++GPI  ++ +EIFP K+RG  I++  +  +  + +VT+    +   +G    F  + V+C +S  F++  VPETKG+ LE I
Sbjct:  401 VAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEI 498          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1
Query:   76 IYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLE 342
            +Y   F  ++GPI  +L  E+F  K+R   +++ A   WI + I++ T P +L ++GL  A+G+YA    IS  F++  V ETKG  LE
Sbjct:  378 LYVFSFGFSWGPIVWVLLGEMFNNKIRAAALSVAAGVQWIANFIISTTFPPLLDTVGLGPAYGLYATSAAISIFFIWFFVKETKGKTLE 466          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 31/98 (31.63%), Postives = 58/98 (59.18%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVI 348
            ++   +++Y  C+  ++GPI  ++ +EIFP K+RG  +++  +  +  + +VT+    +   +G    F  + V+C +S VF+F  VPETKG+ LE I
Sbjct:  401 VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEI 498          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 32/102 (31.37%), Postives = 51/102 (50.00%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            ++   + ++   F   +GPIP +L +EIFP  V+G+   +C +  W    +VT     ++  +   GAF + +  C    +F    VPETKG  LE IT  F
Sbjct:  374 LAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGVCVLTNWFMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFGVLFTLACVPETKGKTLEQITAHF 475          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11
Identity = 30/96 (31.25%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   73 IIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            +++        GP+  ++ AEIFP ++RG+   I     WI + ++ +  P++LSS+GL+  F ++  +  ++  FV+  +PETKG  LE + E F
Sbjct:  360 VLFLAFMQGCVGPVTWLVIAEIFPQRLRGLGSGISVFFLWILNFVIGFAFPILLSSVGLSFTFFIFVALGVLAIGFVYKFMPETKGRTLEELEEHF 455          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 1
Query:   37 PILKSRISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVIT 351
            P     +S A +++Y   F    GP+P ++ +EIFP  +RG  +A+ +   W  +++++ T   +   IGL     +Y V+   S VFV + +PETKG  LE I+
Sbjct:  461 PTFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTVMSLASLVFVIVFIPETKGCSLEQIS 565          
The following BLAST results are available for this feature:
BLAST of EY664828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GTR10_XENTR1.260e-1132.04Solute carrier family 2, facilitated glucose trans... [more]
XYLL1_ARATH2.806e-1131.63D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
GLCP_SYNY32.806e-1137.08Glucose transport protein OS=Synechocystis sp. (st... [more]
XYLL2_ARATH3.665e-1131.63D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
GTR8_BOVIN3.665e-1131.37Solute carrier family 2, facilitated glucose trans... [more]
YNCC_BACSU4.787e-1131.25Putative metabolite transport protein yncC OS=Baci... [more]
GTR12_BOVIN8.165e-1132.38Solute carrier family 2, facilitated glucose trans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664828 ID=EY664828; Name=EY664828; organism=Citrus sinensis; type=EST; length=689bp
CGGTCCGNATTACACGCTCGACCCACGCGTCCGCAGCCCATTCTTAAAAG
CAGGATCTCAACAGCTCGTGTTATAATCTACTTCTGCTGCTTTGTTGCGG
CTTATGGACCAATTCCAAATATCCTTTGTGCAGAGATCTTCCCAACAAAA
GTCCGTGGCATCTGCATTGCCATCTGTGCCATGGCTTACTGGATTTGTGA
CATCATTGTCACCTACACACTGCCTGTAATGCTTAGTTCAATAGGGCTAG
CTGGTGCCTTCGGTGTTTATGCTGTTGTGTGTTTCATCTCCTGGGTTTTC
GTCTTCCTGAGAGTACCTGAAACCAAAGGCATGCCTCTTGAAGTCATTAC
TGAGTTCTTTGCTGTTGGGGCAAGGCAAGCCACCAAGGCTGACTAATCGA
AAACTGAGAATGGCTTTCAGCTTAGCCGGCAGAATTAGCTCATACTTTCA
TTTGGAGAATTTTTGCACAGTGCATTGGGAATCAGGATATTCTAATTAAA
AGAGGTTGTGGCTCTTTCTTTTTTTTTTCCTCTCCGAAATGCATTTTTAG
TATTATATTGTCAATATTGTTTCAAATACATTTGCTCTACTTATTTGATT
TATGAAATATCTTATTAGTGACTACTGAAGCTTCTTTAATACCATATTGT
ATAATGGTTTCATTGAAAAAAAAAAAAAAAAAAAAAAAA
back to top