EY664827

Overview
NameEY664827
Unique NameEY664827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.244e-32
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 3
Query:  279 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVI----ADSRFMCYLPSTLATATMLHTIXEVEPCNPVEHQNLLMGVLNISQDKLKECYLLI 860
            AR E V W+L+V+ + GF  LTA LAVNY DRF+      + + W  QL+AVACLSLAAK++ET VP LLDLQV+  +YVFE +TI RME L+L+ L WR+  VTP +F D                 + C+H+  +++    +D +F+ + PS++A A +L    E      V  +  +   + ++++ +  CY L+
Sbjct:   81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFID----------------FFACKHISNAMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLM 262          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.236e-31
Identity = 72/197 (36.55%), Postives = 118/197 (59.90%), Query Frame = 3
Query:  273 ILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIXEVEPCNPVEHQNLL-MGVLNISQDKLKECYLLI 860
            + AR + V W+L+V+  +G   +TA LAV+Y DRF+  H    +  W  QL+AV CLSLAAK++ET VP +LDLQ++D +Y+FE +TI RMELLVL  L WR+  +TP +F      ++        E +++   + L+ I D+ F+ + PS++A A +L    E+     ++H  L+   ++ + ++ +  CY L+
Sbjct:  113 LAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLPGNG-WAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLM 308          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.595e-31
Identity = 72/195 (36.92%), Postives = 114/195 (58.46%), Query Frame = 3
Query:  288 EVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIXE----VEPCNPVEHQNLLMGVLNISQDKLKECYLLI 860
            E V W+L+V++  GF   TA LAV+Y DRF+ S S   D  W  QL+ VACLSLAAK++E+  P LLDLQ++  +++FE +TIQRMEL+VL  L WR+  VTP +F D    ++G           R   ++LS I +  F+ +  S++A A +L  + E    +   + V  ++     + ++++++  CY L+
Sbjct:  127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLP-DHGWASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRSSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWCIGLTEERISSCYQLL 320          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.696e-31
Identity = 76/217 (35.02%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  144 ESPLPPVLQEHDLFWDDNELLSLICKEKKENFVPSDPI------SDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLG-LKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIXEVE 773
            E+P+   + +      ++E + +   EK++  +PSD         D  L + R++ + W+ +      F  L   LA+NY DRF+  H     K W+ QL+AVACLSLAAK++ET+VP+L+DLQV DP++VFEAK++QRMELLVL+ L+WR+  +TP S+  + +R++           + R   ++ S      F+ + PS +A A  L    E++
Sbjct:   26 ETPIEISIPQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQ 242          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.044e-30
Identity = 75/197 (38.07%), Postives = 113/197 (57.36%), Query Frame = 3
Query:  270 LILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIXEVEPCNPVEHQNLLMGVLNISQDKLKECYLLI 860
            L+  R + ++W+ +V   + F  LTA+L+VNY DRF+      +++  M QL+AVA LSLAAK++ET VP  LDLQV D KYVFE +TI+RMEL VL+ L+WRM  VT  SF D+ + +           L R   L+LS    + F+ + PS +A +  L  + E E       + +     N+ ++++  CY +I
Sbjct:   86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETS---MFERVATCYKNLKKERVLRCYEMI 279          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD42_ARATH (Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.482e-26
Identity = 65/163 (39.88%), Postives = 92/163 (56.44%), Query Frame = 3
Query:  282 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRL-GLKTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATMLHTIXE 767
            R + + W+ +      F  L   LA+NY DRF+  H     K W  QL+AVACLSLAAK++ET VP L+ LQV  P +VFEAK++QRMELLVL+ L+WR+  VTP S+  + + ++ G     H   + R   ++ S      F+ +  S +A A  L    E
Sbjct:   69 RIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGE 231          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD51_ARATH (Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.336e-22
Identity = 70/218 (32.11%), Postives = 113/218 (51.83%), Query Frame = 3
Query:  114 DAETERCEEKESPLPPVLQEHDLFWDDNELLSLICKEK-KENFVPSDPISDEILILARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSH--SFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHLHWE--FLYRCEHLLLSVIADSRFMCYLPSTLATATML 752
            D   ER +++E      + + D   D      L+ KE  +   +PS   S    ++A    ++W+L  +  FGF   TA +A++YFD F+       QKD+ W  +L++VACLSLAAK++E  VP L     +D  +VF+   I++ ELL+LSTL W+MN +TP  +F++ + ++    H   +   L R    LL++  +  F  Y    +A  T L
Sbjct:   25 DETIERSDKQEPHFTTTIDDEDYVAD------LVLKENLRFETLPSKTTSSSDRLIA----IDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAAVTTL 231          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD51_ORYSJ (Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 3
Query:  276 LARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKD-KPWMGQLVAVACLSLAAKVDETQVPLLLDLQ--VKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTHL-HWEFLYRCEHLLLSVIADSRFMCYLPSTLATATML 752
            LAR+  V+W+L  +  FGF   TA LA+ YFDRF L     +   PW  +L+AVAC+SLAAK++E + P L + +  V D  Y F    I+RMELLVLSTL WRM  VTP  +   +  R  L+ H+           L+ S    +  + + PST+A A +L
Sbjct:  107 LARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSR--LRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVL 267          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD52_ORYSJ (Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.729e-20
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 3
Query:  279 ARKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDK-PWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGLKTH 644
            AR   V+W+L  + +FGF   TA LA+ YFDRF L     ++  PW  +L+++AC+S+AAK++E Q P L +      + VF + +I+RMELLVLSTL WRM  VTP  F      RL    H
Sbjct:   99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHH 220          
BLAST of EY664827 vs. ExPASy Swiss-Prot
Match: CCD71_ARATH (Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19
Identity = 52/157 (33.12%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  282 RKEVVEWVLRVKAHFGFTALTAILAVNYFDRFILSHSFQKDKPWMGQLVAVACLSLAAKVDETQVPLLLDLQVKDPKYVFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIVRRLGL-KTHLHWEFLYRCEHLLLSVIADSRFMCYLPSTLATATM 749
            R    +W+++ ++    +  T   A N FDRF+      +   WM +LVAV  LS+A+K +E   PLL +L+++   ++F   T+ +MEL++L  L+WR+N VT  +F   +V ++G+   H+    + R  + LL VI D + + Y PS +ATA +
Sbjct:   78 RFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHM---IMNRITNHLLDVICDLKMLQYPPSVVATAAI 231          
The following BLAST results are available for this feature:
BLAST of EY664827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
CCD21_ORYSJ7.244e-3238.38Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD12_ORYSJ1.236e-3136.55Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD11_ORYSJ3.595e-3136.92Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD41_ARATH4.696e-3135.02Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=... [more]
CCD31_ORYSJ3.044e-3038.07Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD42_ARATH3.482e-2639.88Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=... [more]
CCD51_ARATH2.336e-2232.11Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=... [more]
CCD51_ORYSJ5.204e-2240.49Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD52_ORYSJ3.729e-2043.90Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD71_ARATH1.417e-1933.12Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664827 ID=EY664827; Name=EY664827; organism=Citrus sinensis; type=EST; length=870bp
CTTTGCCTCATNATAATACTGATGCCCACCACCACCAGCTTGAAACCACT
CCACTGGCTCTTGACGGCCTTTTTTGCGATGAAGAAAGTTTCGAGTTTGA
GGAGTGTTGTATTGATGCTGAGACTGAGAGATGTGAGGAAAAGGAGTCGC
CTTTACCACCTGTTTTGCAAGAACATGACTTGTTTTGGGATGATAACGAG
TTGTTGTCTTTGATCTGTAAAGAAAAAAAAGAAAACTTTGTGCCTAGTGA
TCCAATCTCAGATGAGATTTTAATTCTGGCTCGTAAAGAGGTTGTTGAGT
GGGTGCTTAGGGTTAAGGCTCATTTTGGTTTCACTGCTTTGACCGCTATT
CTTGCTGTTAACTACTTTGATAGGTTCATTTTAAGCCATTCGTTTCAAAA
AGACAAGCCCTGGATGGGTCAGCTTGTTGCTGTAGCTTGCTTGTCTCTGG
CTGCTAAAGTGGATGAGACCCAAGTGCCCCTTCTTTTGGACTTGCAAGTG
AAGGACCCGAAATATGTTTTTGAGGCAAAGACTATTCAGAGAATGGAGCT
TCTGGTGCTCTCTACACTTCAATGGAGGATGAATCCTGTGACTCCTATTT
CATTCTTTGATCACATTGTGAGAAGGCTTGGGTTGAAGACCCACTTGCAC
TGGGAATTTCTCTATAGGTGTGAGCATTTGCTTCTCTCTGTCATTGCTGA
TTCACGGTTTATGTGCTATCTTCCTTCTACATTGGCTACTGCAACAATGC
TTCATACAATTCANGAGGTTGAGCCATGCAATCCTGTGGAACACCAAAAT
CTGCTTATGGGTGTGCTTAACATCAGTCAGGATAAGCTTAAGGAGTGCTA
CTTGCTCATCCTANAGTATC
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