CX672482

Overview
NameCX672482
Unique NameCX672482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_SPISP (Ferredoxin--NADP reductase OS=Spirulina sp. GN=petH PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.840e-78
Identity = 136/223 (60.99%), Postives = 178/223 (79.82%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KTVSLCV++L Y + E GE V GVCS +LC+L+ GA+V ITGPVGKEML+P D +AT+IM+ATGTGIAPFR FLW++F E+HEDYKF GLAWLF G+P S ++LY++E E+++E+ PENFRL  A+SREQ+N +G KMYIQ R+ E A++LWEL++K NT+ Y+CGL+GME GID+ M + A    +DW DY+K+LKK  +W+VE Y
Sbjct:   72 RLYSIASTRHGDHVDDKTVSLCVRQLEYKHPETGETVYGVCSTYLCNLEAGADVAITGPVGKEMLLPEDEDATIIMMATGTGIAPFRAFLWRIFKEQHEDYKFKGLAWLFFGIPYSPNILYQQELEELQEEFPENFRLTLAISREQQNPEGGKMYIQDRIKENADQLWELIQKPNTHTYICGLKGMEGGIDEGMSAAAGKFDVDWSDYQKELKKKHRWHVETY 294          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_THEEB (Ferredoxin--NADP reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=petH PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.534e-76
Identity = 138/224 (61.61%), Postives = 176/224 (78.57%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDY-KKQLKKAEQWNVEVY 834
            RLYSIAS+  GDF D KTVSLCV+RL Y + E GE + GVCS++L  L+PG EVKITGPVGKEML+  DP AT+IMLATGTGIAPFR FLW+MF E + DY+F GLAWLF GV  ++++LYK+E E ++ + P++FRL +A+SREQK   G KMYIQ R+AE+A+E+W+LL+K NT+VYMCGLRGME GID+ M + AA +G DW ++ K  LKK  +W+VE Y
Sbjct:  163 RLYSIASTRHGDFQDDKTVSLCVRRLEYKDKETGETIYGVCSSYLNQLQPGDEVKITGPVGKEMLLSDDPEATIIMLATGTGIAPFRAFLWRMFKENNPDYQFKGLAWLFFGVAYTANILYKDELEAIQAQYPDHFRLTYAISREQKTPDGGKMYIQGRIAEHADEIWQLLQKKNTHVYMCGLRGMEPGIDEAMTAAAAKNGADWQEFLKGTLKKEGRWHVETY 386          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_ANASP (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7120) GN=petH PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.117e-74
Identity = 132/227 (58.15%), Postives = 177/227 (77.97%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHE----DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KT+SLCV++L Y + E+GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW+MF +       +Y+F G +WL  GVPT+ ++LYKEE E++++K P+NFRL +A+SREQKN +G +MYIQ R+AE+A+ELW+L+K + T+ Y+CGLRGME+GID  + + AA +G+ W DY+K LKKA +W+VE Y
Sbjct:  214 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQLIKNEKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_ANAVT (Ferredoxin--NADP reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petH PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.459e-74
Identity = 132/227 (58.15%), Postives = 176/227 (77.53%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHE----DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KT+SLCV++L Y + E GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW+MF +       +Y+F G +WL  GVPT+ ++LYKEE E++++K P+NFRL +A+SREQKN +G +MYIQ R+AE+A+ELW+L+K + T+ Y+CGLRGME+GID  + + AA +G+ W DY+K LKKA +W+VE Y
Sbjct:  214 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPETGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQLIKNEKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_ANASO (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7119) GN=petH PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.905e-74
Identity = 132/227 (58.15%), Postives = 176/227 (77.53%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHE----DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KT+SLCV++L Y + E+GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW+MF +       +Y+F G +WL  GVPT+ ++LYKEE E++++K P+NFRL +A+SREQKN +G +MYIQ R+AE+A+ELW+L+K   T+ Y+CGLRGME+GID  + + AA +G+ W DY+K LKKA +W+VE Y
Sbjct:  214 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQLIKNQKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR_SYNP2 (Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.488e-74
Identity = 131/224 (58.48%), Postives = 178/224 (79.46%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAE-VKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D+KTVSLCV++L Y + E+GE V GVCS +LC+L  G + VKITGPVGKEML+P D +ATV+MLATGTGIAPFR FLW+MF E+HEDYKF G AWL  GVP ++++LYK++FEKM  + P+NFRL +A+SREQK   G K+Y+Q+R++EYA+EL+E+++K NT+VYMCGL+GM+  ID+   + A   G++W + ++ +KK  +W+VEVY
Sbjct:  179 RLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPIDETFTAEAEKRGLNWEEMRRSMKKEHRWHVEVY 402          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR3_ORYSJ (Ferredoxin--NADP reductase, embryo isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0147900 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.869e-64
Identity = 124/227 (54.63%), Postives = 158/227 (69.60%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KT SLCV+R VY    T +     KG+CSNFLCD KPG +V+ITGP GK ML+P D PNAT IM+ATGTG+AP+RG+L +MF E    +KF GLAWLFLGV  + SLLY EEF    ++ P+NFR D A+SREQKN+ G KMY+Q ++ EY++E+++LL     ++Y CGL+GM  GI D +  +A   G  W     QLKK +QW+VEVY
Sbjct:  153 RLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPTKKGICSNFLCDSKPGDKVQITGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYLRRMFMEDVPSFKFGGLAWLFLGVANTDSLLYDEEFTNYLQQYPDNFRYDKALSREQKNKNGGKMYVQDKIEEYSDEIFKLL-DGGAHIYFCGLKGMMPGIQDTLKRVAEQRGESWEQKLSQLKKNKQWHVEVY 378          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FNRR1_ARATH (Ferredoxin--NADP reductase, root isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=RFNR1 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.581e-63
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D KT SLCV+R +Y    T +      GVCSNFLC+ KPG +VKITGP GK ML+P D P AT IM+ATGTG+AP+RG+L +MF E   ++KF+GLAWLFLGV  S SLLY EEF   ++  PENFR D A+SRE+KN+KG KMY+Q ++ EY++E+++LL  +  ++Y CGL+GM  GI D +  +A   G  W     QL+K +QW+VEVY
Sbjct:  153 RLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVCSNFLCNAKPGDKVKITGPSGKVMLLPEDDPKATHIMIATGTGVAPYRGYLRRMFMENVPNFKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKALSREEKNKKGGKMYVQDKIEEYSDEIFKLL-DNGAHIYFCGLKGMMPGIQDTLKRVAEERGESWEQKLTQLRKNKQWHVEVY 378          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FNRR2_ARATH (Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=RFNR2 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.402e-63
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GDF D KT SLCV+R VY    T +      GVCSNFLCD KPG +++ITGP GK ML+P  DPNAT IM+ATGTG+AP+RG+L +MF E   +  F+GLAWLFLGV  + SLLY EEF K  +  P+NFR D A+SRE+KN+KG KMY+Q ++ EY++E+++LL  +  ++Y CGL+GM  GI D +  +A   G  W     QL+K +QW+VEVY
Sbjct:  157 RLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKIQITGPSGKVMLLPESDPNATHIMIATGTGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDKALSREEKNKKGGKMYVQDKIEEYSDEIFKLL-DNGAHIYFCGLKGMMPGIQDTLKRVAEERGESWDLKLSQLRKNKQWHVEVY 382          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: FENR2_ORYSJ (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784700 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.853e-62
Identity = 122/227 (53.74%), Postives = 156/227 (68.72%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+  GD  D +T SLCV+R VY    T +      GVCSNFLC+ KPG +VK+TGP GK ML+P  DPNAT IM+ATGTG+APFRG+L +MF E    Y+F GLAWLFLGV  + SLLY EEF    ++ P+NFR D A+SREQKN+   KMY+Q ++ EY++E+++LL     ++Y CGL+GM  GI D +  +A   G  W     QLKK +QW+VEVY
Sbjct:  153 RLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKVKVTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPKYRFGGLAWLFLGVANTDSLLYDEEFTSYLKQYPDNFRYDKALSREQKNKNAGKMYVQDKIEEYSDEIFKLL-DGGAHIYFCGLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY 378          
The following BLAST results are available for this feature:
BLAST of CX672482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
FENR_SPISP2.840e-7860.99Ferredoxin--NADP reductase OS=Spirulina sp. GN=pet... [more]
FENR_THEEB4.534e-7661.61Ferredoxin--NADP reductase OS=Thermosynechococcus ... [more]
FENR_ANASP1.117e-7458.15Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_ANAVT1.459e-7458.15Ferredoxin--NADP reductase OS=Anabaena variabilis ... [more]
FENR_ANASO1.905e-7458.15Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_SYNP22.488e-7458.48Ferredoxin--NADP reductase OS=Synechococcus sp. (s... [more]
FENR3_ORYSJ8.869e-6454.63Ferredoxin--NADP reductase, embryo isozyme, chloro... [more]
FNRR1_ARATH2.581e-6354.19Ferredoxin--NADP reductase, root isozyme 1, chloro... [more]
FNRR2_ARATH4.402e-6354.19Ferredoxin--NADP reductase, root isozyme 2, chloro... [more]
FENR2_ORYSJ2.853e-6253.74Ferredoxin--NADP reductase, root isozyme, chloropl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_17C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C03-E5-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672482 ID=CX672482; Name=CX672482; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTAGAGACAATAGCCGTAAATTGCTCCGTTAAAAAAGACAAAAATA
GAAAGAAAATTTGAAAATAGTCTACCTATCTACACAGTGCAGAGGGAAAT
ATCATACAATGGGACAAAAAGGAAAAAAAATGAAAATGTGAGGGATGTTT
TGTACATGTAAAGCATTAGTAGACTTCAACATTCCATTGCTCAGCTTTCT
TCAATTGCTTTTTGTAGTCCAGCCAATCAATGCCATCGTTAGCGGCCAAT
GACACCATAATGTCATCGATTCCCTTCTCCATGCCTCTCAACCCACACAT
GTACACATAAGTGTTATCTTTCTTGAGTAATTCCCACAGCTCATTTGCAT
ATTCAGCCATTCGGGTTTGAATGTACATCTTCTCACCCTTCTCATTCTTT
TGTTCTCTGCTCACTGCAAAGTCAAGCCTGAAGTTTTCCGGGGCCTTCTC
CTTCATCTTCTCAAACTCCTCCTTGTAGAGTAGGGAACTGCTAGTCGGGA
CACCCAAGAAGAGCCAAGCCAAACCATTGAACTTGTAGTCTTCGTGCTTC
TCAAAGAACATTTTCCACAAAAATCCACGGAATGGAGCGATTCCAGTTCC
AGTTGCAAGCATGATGACTGTAGCATTGGGATCCCTTGGCATGAGCATTT
CTTTCCCAACAGGTCCTGTAATTTTCACTTCAGCCCCAGGCTTCAAGTCA
CACAAGAAATTTGAGCAGACTCCCTTAACAATTTCTCCATTTTCGTTGGT
GTACACAAGCCTTTTCACACATAAAGAAACAGTTTTGGAGTCTCCAAAGT
CACCAAGGGCACTGCTAGCAATGGAGTATAATCTCA
back to top