CX672482

Overview
NameCX672482
Unique NameCX672482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup B GN=cysJ1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 69/231 (29.87%), Postives = 116/231 (50.22%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENF--RLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSI SSA  + GD   +++ V R  +    G    G  S FL D L+    V++         +P D    ++M+ +GTG+APFR F+ +   E  E     G  WL  G P  +   LY+ E+++    A + F  R DFA SR+Q+    EK+Y+Q ++ E A  LW+ L ++  ++Y+CG      + +E  + D+++     D     +Y   L++ +++  +VY
Sbjct:  391 RLYSI-SSAQAEVGDEVHLTVGVVRFEH---EGRARTGGASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAE-----GKNWLIFGNPHFARDFLYQTEWQQF---AKDGFLHRYDFAWSRDQE----EKIYVQDKIREQAEGLWQWL-QEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY 604          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIM0 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C (strain 053442) GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.812e-16
Identity = 70/231 (30.30%), Postives = 118/231 (51.08%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENF--RLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSI+SS   + GD   V L V  + + +E G    G  S FL D L+    V++         +P D    ++M+ +GTG+APFR F+ +   E  E     G  WL  G P  ++  LY+ E+++    A + F  R DFA SR+Q+    EK+Y+Q ++ E A  LW+ L ++  ++Y+CG      + +E  + D+++     D     +Y   L++ +++  +VY
Sbjct:  391 RLYSISSSQ-AEVGDE--VHLTVGAVRFEHE-GRARVGGASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAE-----GKNWLIFGNPHFAADFLYQTEWQQF---AKDGFLHRYDFAWSRDQE----EKIYVQDKIREQAEGLWQWL-QEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY 604          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 70/229 (30.57%), Postives = 113/229 (49.34%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS+      +   V + V  + Y  E G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+ +   E  E     G  WLF G P  +   LY+ E+++  ++   + R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG        +EK + +++      D     +Y  +L+   ++  +VY
Sbjct:  386 RLYSIASAQAEVESE---VHITVGVVCYDIE-GRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGVE-----GKNWLFFGNPHFTEDFLYQVEWQRYVKEGGLS-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMF (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 70/231 (30.30%), Postives = 117/231 (50.65%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENF--RLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSI+SS   + GD   V L V  + + +E G    G  S FL D L+    V++         +P D    ++M+ +GTG+APFR F+ +   E  E     G  WL  G P  +   LY+ E+++    A + F  R DFA SR+Q+    EK+Y+Q ++ E A  LW+ L ++  ++Y+CG      + +E  + D+++     D     +Y   L++ +++  +VY
Sbjct:  391 RLYSISSSQ-AEVGDE--VHLTVGAVRFEHE-GRARAGGASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAE-----GKNWLIFGNPHFARDFLYQTEWQQF---AKDGFLHRYDFAWSRDQE----EKIYVQDKIREQAEGLWQWL-QEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY 604          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_BLOFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Blochmannia floridanus GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 63/204 (30.88%), Postives = 108/204 (52.94%), Query Frame = -3
Query:  232 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLG-VPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 834
            R YSIAS A  + G+   +++ V R      NG I  G  S++L D ++   E++I         +P+DPN ++IM+  GTGIAPFR F+ +   +     K  G  WLF G +  +   LY+ E++   +    N ++D A SR+Q      K+Y+Q ++     ELW+ ++K   Y+Y+CG  + M + ++  +V++ +  G
Sbjct:  397 RFYSIAS-AQSEVGEEIHITVSVVRYTI---NGRIRSGGASSYLVDRVQDHDEIRIFVESNDNFRLPKDPNVSIIMIGAGTGIAPFRSFMQQRALD-----KALGKNWLFFGNLKFTDDFLYQIEWKTYFKSGILN-KIDTAWSRDQ----DYKVYVQDKLLSNGLELWDWIQK-GAYIYVCGDAKYMARDVEQALVTVVSIHG 585          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_BAUCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = -3
Query:  208 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLC-DLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLG-VPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRG-MEKGIDDIMVSLAANDGIDWLDYKK 834
            RLYSIASS   + GD   +++ V R      +G+I  G  S++L   L+    +++         +P +PN  +IM+ +GTGIAPFRGF+     ++ E     G  WLF G    +   LY+ E+++  +    N ++D A S++Q     +K+Y+Q R+ E   ELW  + +D  ++Y+CG    M + ++  +V L A  G   +DY++
Sbjct:  382 RLYSIASSQ-AEVGDEVHLTVSVVRYEI---DGKIRTGGASSYLAYRLQESEPIRVFIEHNDNFRLPNNPNTAIIMIGSGTGIAPFRGFM-----QQREATTAKGKNWLFFGNQHLTDDFLYQVEWQRYIKNGLLN-KIDVAWSQDQ----NKKIYVQDRLLEKGIELWNWI-QDGAHIYVCGNANLMARDVEKALVKLIAIHG--RMDYEQ 576          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16
Identity = 64/204 (31.37%), Postives = 104/204 (50.98%), Query Frame = -3
Query:  232 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTS-SSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 834
            RLYSIASS      +   V L V  + Y  + G    G  S+FL D L     +++         +P +P+A VIM+  GTG+APFR F+     ++ ++    G  WLF G P      LY+ E++   ++      +D A SR+Q     +K+Y+Q ++ E A E+W+ +K+D  Y+Y+CG    M K +D  ++ +   +G
Sbjct:  392 RLYSIASSQAEVENE---VHLTVGVVRYEID-GHKRAGGASSFLADRLAENGNLRVFVEHNDNFRLPDNPDAPVIMIGPGTGVAPFRAFM-----QQRDNDGAKGKNWLFFGNPHFIEDFLYQVEWQAYVKQGLLT-HIDLAWSRDQ----AKKVYVQDKLREKAAEIWKWIKEDGAYLYVCGDATHMAKDVDKALIDIIRQEG 581          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16
Identity = 69/229 (30.13%), Postives = 113/229 (49.34%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS A  +      +++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+ +   E  E     G  WLF G P  +   LY+ E+++  ++   + R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG        +EK + +++      D     +Y  +L+   ++  +VY
Sbjct:  386 RLYSIAS-AQAEVESEVHITVGVVRY---DIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVE-----GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLS-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi A GN=cysJ PE=3 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.273e-16
Identity = 69/229 (30.13%), Postives = 113/229 (49.34%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS A  +      +++ V R    +  G    G  S+FL   ++   EV++         +P +P   VIM+  GTGIAPFR F+ +   +  E     G  WLF G P  +   LY+ E+++  ++   N R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG        +EK + +++    A D     +Y  +L+   ++  +VY
Sbjct:  386 RLYSIAS-AQAEVESEVHITVGVVRY---DIEGRARAGGASSFLAGRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAE-----GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLN-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDARCMAVDVEKALLEVIAEFGAMDIESADEYLSELRVERRYQRDVY 599          
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 6.886e-16
Identity = 68/229 (29.69%), Postives = 113/229 (49.34%), Query Frame = -3
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIAS A  +      +++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+ +   +  E     G  WLF G P  +   LY+ E+++  ++   + R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG        +EK + +++      D     +Y  +L+   ++  +VY
Sbjct:  386 RLYSIAS-AQAEVESEVHITVGVVRY---DIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAE-----GKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLS-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
The following BLAST results are available for this feature:
BLAST of CX672482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CYSJ_NEIMB1.062e-1629.87Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIM01.812e-1630.30Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB2.367e-1630.57Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIMF2.367e-1630.30Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BLOFL2.367e-1630.88Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BAUCH2.367e-1631.13Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ZYMMO3.091e-1631.37Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY3.091e-1630.13Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPA5.273e-1630.13Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTI6.886e-1629.69Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C03-E5-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672482 ID=CX672482; Name=CX672482; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTAGAGACAATAGCCGTAAATTGCTCCGTTAAAAAAGACAAAAATA
GAAAGAAAATTTGAAAATAGTCTACCTATCTACACAGTGCAGAGGGAAAT
ATCATACAATGGGACAAAAAGGAAAAAAAATGAAAATGTGAGGGATGTTT
TGTACATGTAAAGCATTAGTAGACTTCAACATTCCATTGCTCAGCTTTCT
TCAATTGCTTTTTGTAGTCCAGCCAATCAATGCCATCGTTAGCGGCCAAT
GACACCATAATGTCATCGATTCCCTTCTCCATGCCTCTCAACCCACACAT
GTACACATAAGTGTTATCTTTCTTGAGTAATTCCCACAGCTCATTTGCAT
ATTCAGCCATTCGGGTTTGAATGTACATCTTCTCACCCTTCTCATTCTTT
TGTTCTCTGCTCACTGCAAAGTCAAGCCTGAAGTTTTCCGGGGCCTTCTC
CTTCATCTTCTCAAACTCCTCCTTGTAGAGTAGGGAACTGCTAGTCGGGA
CACCCAAGAAGAGCCAAGCCAAACCATTGAACTTGTAGTCTTCGTGCTTC
TCAAAGAACATTTTCCACAAAAATCCACGGAATGGAGCGATTCCAGTTCC
AGTTGCAAGCATGATGACTGTAGCATTGGGATCCCTTGGCATGAGCATTT
CTTTCCCAACAGGTCCTGTAATTTTCACTTCAGCCCCAGGCTTCAAGTCA
CACAAGAAATTTGAGCAGACTCCCTTAACAATTTCTCCATTTTCGTTGGT
GTACACAAGCCTTTTCACACATAAAGAAACAGTTTTGGAGTCTCCAAAGT
CACCAAGGGCACTGCTAGCAATGGAGTATAATCTCA
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