CX672482

Overview
NameCX672482
Unique NameCX672482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 67/229 (29.26%), Postives = 114/229 (49.78%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +   V + V  + Y  E G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++   + R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG      + +E+ + +++      D     ++  +L+   ++  +VY
Sbjct:  388 RLYSIASSQAEVESE---VHITVGAVRYEIE-GRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLS-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDANCMAKDVEQALLEVIAEFGGMDAEAADEFLSELRVERRYQRDVY 601
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  405 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 618
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis (strain Pestoides F) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  399 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPN (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  399 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPE (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  393 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  393 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_YERP3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 64/229 (27.95%), Postives = 115/229 (50.22%), Query Frame = -3 
Query:  169 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 834
            RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  399 RLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = -3 
Query:  232 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 834
            RLYSIASS   +  +   V++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++     R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG    M K ++  ++ + A  G
Sbjct:  386 RLYSIASSQ-AEVENEVHVTVGVVRY---DVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQK----EKVYVQDKLREQGAELWRWI-NDGAHIYVCGDANRMAKDVEQALLEVIAEFG 574
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIDS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = -3 
Query:  232 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 834
            RLYSIASS   +  +   V++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++     R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG    M K ++  ++ + A  G
Sbjct:  386 RLYSIASSQ-AEVENEVHVTVGVVRY---DVEGRTRAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQK----EKVYVQDKLREQGAELWRWI-NDGAHIYVCGDANRMAKDVEQALLEVIAEFG 574
[Close]
BLAST of CX672482 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOUT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain UTI89 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = -3 
Query:  232 RLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 834
            RLYSIASS   +  +   V++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++     R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG    M K ++  ++ + A  G
Sbjct:  386 RLYSIASSQ-AEVENEVHVTVGVVRY---DVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDANRMAKDVEQALLEVIAEFG 574
The following BLAST results are available for this feature:
BLAST of CX672482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CYSJ_CITK88.994e-1629.26Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPS1.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPP1.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPN1.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPE1.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPA1.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERP31.175e-1527.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHISS1.534e-1531.86Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIDS1.534e-1531.86Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOUT1.534e-1531.86Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C03-E5-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672482 ID=CX672482; Name=CX672482; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTAGAGACAATAGCCGTAAATTGCTCCGTTAAAAAAGACAAAAATA
GAAAGAAAATTTGAAAATAGTCTACCTATCTACACAGTGCAGAGGGAAAT
ATCATACAATGGGACAAAAAGGAAAAAAAATGAAAATGTGAGGGATGTTT
TGTACATGTAAAGCATTAGTAGACTTCAACATTCCATTGCTCAGCTTTCT
TCAATTGCTTTTTGTAGTCCAGCCAATCAATGCCATCGTTAGCGGCCAAT
GACACCATAATGTCATCGATTCCCTTCTCCATGCCTCTCAACCCACACAT
GTACACATAAGTGTTATCTTTCTTGAGTAATTCCCACAGCTCATTTGCAT
ATTCAGCCATTCGGGTTTGAATGTACATCTTCTCACCCTTCTCATTCTTT
TGTTCTCTGCTCACTGCAAAGTCAAGCCTGAAGTTTTCCGGGGCCTTCTC
CTTCATCTTCTCAAACTCCTCCTTGTAGAGTAGGGAACTGCTAGTCGGGA
CACCCAAGAAGAGCCAAGCCAAACCATTGAACTTGTAGTCTTCGTGCTTC
TCAAAGAACATTTTCCACAAAAATCCACGGAATGGAGCGATTCCAGTTCC
AGTTGCAAGCATGATGACTGTAGCATTGGGATCCCTTGGCATGAGCATTT
CTTTCCCAACAGGTCCTGTAATTTTCACTTCAGCCCCAGGCTTCAAGTCA
CACAAGAAATTTGAGCAGACTCCCTTAACAATTTCTCCATTTTCGTTGGT
GTACACAAGCCTTTTCACACATAAAGAAACAGTTTTGGAGTCTCCAAAGT
CACCAAGGGCACTGCTAGCAATGGAGTATAATCTCA
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