EY664805

Overview
NameEY664805
Unique NameEY664805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664805_ssr337 microsatellite EY664805_ssr337:337..348. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7966 contig Csv1_Contig7966:1..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 1
Query:  397 DSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSN-----DGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHT 684
            +  ESK+R     +    G  +  +  +   VV +TS+     DG+ WRKYGQK +    +PRSY++CT     GC  TK V+R  DD +   TTYIG HT
Sbjct:  332 EESESKRRKLEAYATETSGSTRASREPRV--VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT---ANGCTVTKHVERASDDFKSVLTTYIGKHT 427          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 1
Query:  460 KRKKNSQTWTVVSST----SNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHT 684
            +++KN Q  T+   T    S+D  AWRKYGQK I  + +PR+Y+RC+    +GC A KQV+R + DP ++  TY G HT
Sbjct:  145 RKRKNQQKRTICHVTQENLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSS--KGCLARKQVERSNLDPNIFIVTYTGEHT 221          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 1
Query:  367 NSDDYRRRSEDS-------GESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSN------DGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHH 681
            N++D   + ED+       GES K+      ++K+G  K +K  +   V   T +      DG+ WRKYGQK + N+ +PRSY+RCT    Q C   K+V+R   DP +  TTY G H
Sbjct:   82 NTNDKSDQMEDNEGDLHGVGESSKQ------LTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT---TQKCNVKKRVERSFQDPSIVITTYEGKH 190          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  508 NDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIG--HHTCRDII 699
            +DG+ WRKYGQK + N  HPRSY+RCT+     C   KQVQR   DP +  TTY G  +H C  ++
Sbjct:  114 DDGYRWRKYGQKSVKNNAHPRSYYRCTY---HTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLM 176          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 40/105 (38.10%), Postives = 52/105 (49.52%), Query Frame = 1
Query:  385 RRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTS-----NDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHT 684
            R +E  G          S  K    K+KK  +      + S     +DG+ WRKYGQK + N   PRSY++CT    +GCR  KQVQR+  D  +  TTY G HT
Sbjct:   19 RLTEFHGVDNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCTE---EGCRVKKQVQRQWGDEGVVVTTYQGVHT 120          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1
Query:  373 DDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVS----STSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHH 681
            DD ++RS     S    A    +S+    K KKN Q   V      +  +D  AWRKYGQK I  + +PRSY+RC+    +GC A KQV+R   +P+ +  TY   H
Sbjct:   85 DDKKQRSHGCLLSNGSRADHIRISESKSKKSKKNQQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSS--KGCLARKQVERNPQNPEKFTITYTNEH 189          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 1
Query:  421 PAAKDSVSKRGCYKRKKNSQTWTVVS-------STSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIG--HHTCRDII 699
            P   D + ++G   ++K S+    ++          +DG+ WRKYGQK + +  HPRSY+RCT+     C   KQVQR   DP +  TTY G  +H C  ++
Sbjct:   62 PPENDQIGEKGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTY---HTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLM 160          
BLAST of EY664805 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 1
Query:  379 YRRR--SEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTV--------VSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHH 681
            YR+R    +  ES     +  +  K  C K +KN    TV        ++    D ++WRKYGQK I  + HPR Y++C+    +GC A K V+R  DDP M   TY G H
Sbjct:  193 YRKRCLEHEHSESFSGKVSGSAYGKCHCKKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCS--TFRGCPARKHVERALDDPAMLIVTYEGEH 301          
The following BLAST results are available for this feature:
BLAST of EY664805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
WRK34_ARATH1.545e-1138.61Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRK27_ARATH2.018e-1144.30Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK71_ARATH3.442e-1136.44Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRK56_ARATH5.872e-1148.48Probable WRKY transcription factor 56 OS=Arabidops... [more]
WRK45_ARATH5.872e-1138.10Probable WRKY transcription factor 45 OS=Arabidops... [more]
WRK29_ARATH5.872e-1137.38Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK24_ARATH5.872e-1135.29Probable WRKY transcription factor 24 OS=Arabidops... [more]
WRK11_ARATH5.872e-1136.04Probable WRKY transcription factor 11 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664805 ID=EY664805; Name=EY664805; organism=Citrus sinensis; type=EST; length=920bp
CAAACTCCAGTTTTCCGGTCCGNATTCCCGCGTCGACCCAGCGTCCGCAA
AATTTAACTGTTAAAAAATTAATAAAAAACATAAAAATAAAGGTGAGGTA
GCAAGATGGGCACTCTTTGTTCAGAGAAAACATCTAGGGAAAAGATGGCG
AAGGAGCTTGTGAAGGGTAAGAAATTTGCCCACCAGCTTCAGGTTCTCCT
TCAAAAGCCCTTTGAAGAAGATGGGTTGGTTTCGGCTGAGGATCTTGTTG
TGAAGATCTTGAGATCTTTCACTCAGACTCTTTCTGTGCTCGGTACTACT
GTTACTACTTCTTGTGATGATGATCATGAGAAGTATCAGCAGCAGCAGGC
GAATTCTTGTAATGTTAATTCCGATGACTATCGCCGGAGATCGGAAGATT
CCGGGGAGAGTAAGAAGAGGCCGGCGGCGAAGGACAGTGTCAGTAAGAGA
GGATGCTACAAGAGAAAGAAAAATTCGCAAACATGGACAGTAGTTTCTTC
AACCAGTAATGATGGTCATGCATGGAGAAAATATGGCCAAAAGGAGATCC
TCAATACTAAACATCCAAGGAGCTACTTCAGGTGTACGCATAAGTATGTG
CAGGGCTGCCGGGCAACGAAACAAGTTCAAAGAAGAGACGATGATCCACA
AATGTATGATACAACATACATAGGCCATCATACCTGCAGAGATATCATCA
GCTTCCCACAAATTGTGGCTGAAAGTTCTGAGCCTAATTGGGGTAGTACT
ATTAGCACTGGTGGTTCTTTTGTAGTGAGTTCCTCGTCTAGCATCCCGAC
AGAAGAAATCAAACAAGAATTGCAGGGAGAGACCACAGCACAGATCATCA
AGATTTGTCCTCTCTGGATCAATTGCGTGGGAAGATTTTGTTTCTTTTCA
TCATCTGATGAGCCAGAGCA
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