CX672441

Overview
NameCX672441
Unique NameCX672441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  455 QDSKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREP-RKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 679
            + S +    + Q  K   +RGVR R WGK+ +EIR+P R  +R+WLGTF T E AARA+D AA +++G+ AILNFP
Sbjct:    2 ESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 2
Query:  461 SKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKK-SRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 679
            S + K  R + ++H  YRGVR R WGK+ +EIR+P KK SRIWLGTF +   AARA+D AA  ++G  A+LNFP
Sbjct:   93 SNRKKTKRFEETRH--YRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  509 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNS 712
            Y+GVR R WGKWV+EIREP + +R+WLGTF T   AA A+D AA  + G  A LN PE   S P+  S
Sbjct:   42 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTAS 109          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.160e-14
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  491 SSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPN 709
            S K   +RGVR R WG++ +EIR+P KK+R+WLGTF + E AARA+D AA +++G  A  NFP  + S P PN
Sbjct:   22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPN 94          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 2
Query:  491 SSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 679
            S K P YRGVR R WG++ +EIR+P KKSR+WLGTF +   AARA+D AA +++G  A  NFP
Sbjct:   21 SVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 2
Query:  440 PTNAHQDSKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP---ELAD 691
            P   +Q     K +R        YRGVR R WG++ +EIR+P KK+R+WLGTF T E AARA+D AA   +G  A  NFP   EL+D
Sbjct:   10 PATTNQTHNNAKEIR--------YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSD 88          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 2
Query:  488 QSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 679
            + SK   YRGVR R WG++ +EIR+P KK R+WLG+F T E AARA+D AA+  +G+ A  NFP
Sbjct:   46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 2
Query:  509 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNS 712
            +RGVR R+WG WVSEIR P  K+RIWLGTF T E AARA+D AA  + G  A  NFP   +++P  +S
Sbjct:    8 FRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNAIPTSSS 75          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2
Query:  509 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFP 679
            +RGVR R+WG WV+EIR P  K RIWLGTF T E AARA+D AA+ + G +A  NFP
Sbjct:    7 FRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFP 63          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  509 YRGVRMRNWGKWVSEIREPRKK-SRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLP-RPNSLAPR 724
            YRGVR R WGK+ +EIR+P+K  +R+WLGT+ TPE AA A+D AA  ++G+ A LNFP L  S    P  + PR
Sbjct:   92 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPR 165          
The following BLAST results are available for this feature:
BLAST of CX672441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ERF98_ARATH6.248e-1450.00Ethylene-responsive transcription factor ERF098 OS... [more]
EF107_ARATH6.248e-1454.05Ethylene-responsive transcription factor ERF107 OS... [more]
DRE2D_ARATH6.248e-1454.41Dehydration-responsive element-binding protein 2D ... [more]
ERF82_ARATH8.160e-1452.05Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF83_ARATH1.066e-1357.14Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF78_ARATH1.066e-1347.13Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF77_ARATH1.066e-1354.69Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF03_ARATH1.066e-1355.88Ethylene-responsive transcription factor ERF003 OS... [more]
WIN1_ARATH1.818e-1361.40Ethylene-responsive transcription factor WIN1 OS=A... [more]
ERF99_ARATH1.818e-1352.70Ethylene-responsive transcription factor 13 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16H12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16H12-P24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672441 ID=CX672441; Name=CX672441; organism=Citrus sinensis; type=EST; length=820bp
CGACTCTGCTTTGCTATCTCCATTGAATAGTATTTATGTACGCATATCAA
TTCGTCATCAATCCTTTTGACGAAACACAAAAAACAGGTACTTGCTTTCA
TTGGCCATCTCTTTCCTCTAATTTGTTTCTAAACAACAAATTACAAGCCC
CTTCTCCCTCTCAGTTAACCTCCCTCCGAAACTTGACCTCCTCAGCTCTC
CCATTTATTCTTTGCTCTATTTTGCTTTCAAACAAAAATTTCCACTTCGC
CCCAAACTTTCTTCCTTGTCTTCATTTTAGTCCCTTTATTTTTTTTTAAT
GAACTGAATCCAAATAATAATCACCATCTTGTTAATAATCAGTTTCGTCA
AGAGTAGCGACATCAACAACGACTACAAGATGAGTGAACCGCAAAACTCA
TCGGAAGCAGAAAGCAGCTCGTCAAACTCATCATTGTCGCCAACAAATGC
TCATCAAGACTCCAAAAAGATCAAAAGAATGAGAGATCAATCAAGCAAGC
ACCCCGTTTATCGGGGCGTCCGGATGAGGAACTGGGGCAAATGGGTCTCC
GAAATCCGTGAGCCCCGCAAAAAATCCCGTATCTGGCTCGGCACTTTCCC
CACGCCCGAAATGGCCGCACGTGCGCATGACGTGGCTGCCTTGAGCATCA
AGGGCAACTCAGCAATCCTCAACTTCCCAGAACTCGCTGACTCGCTCCCA
CGTCCTAACTCTCTCGCCCCACGTGACGTCCAAGCCGCCGCTGCTAAGGC
TGCTCAAATGGACAAGTTTGACTCCTCGTCTTCATCTTCTCTGTCATCTT
TGGTTTCTGCTATGGATTTG
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