EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ASPFU (Mitogen-activated protein kinase hog1 OS=Aspergillus fumigatus GN=hog1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.388e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ASPCL (Mitogen-activated protein kinase hog1 OS=Aspergillus clavatus GN=hog1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.388e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ALTBR (Mitogen-activated protein kinase HOG1 OS=Alternaria brassicicola GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.388e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = -1
Query:   23 YQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 205
            ++F+  YI  E M+TDL  ++    +L+E+H + F+YQLLRGLKYIHSANV+HRDLKP+N+
Sbjct:   96 FKFSVAYIVQEYMETDLACLLEQG-TLTEDHAKLFMYQLLRGLKYIHSANVLHRDLKPANI 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: KSS1_YEAST (Mitogen-activated protein kinase KSS1 OS=Saccharomyces cerevisiae GN=KSS1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = -1
Query:   17 VYIAAELMDTDLYQIIRSNQS----LSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 190
            VY+  ELM+TDL ++I +  S    LS++H QYF YQ+LR LK IHSA VIHRD+KPSNL L
Sbjct:   90 VYLVEELMETDLQKVINNQNSGFSTLSDDHVQYFTYQILRALKSIHSAQVIHRDIKPSNLLL 151          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L  +  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEHQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG2_ZYGRO (Mitogen-activated protein kinase HOG2 OS=Zygosaccharomyces rouxii GN=HOG2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRO (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_YEAST (Mitogen-activated protein kinase HOG1 OS=Saccharomyces cerevisiae GN=HOG1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
HOG1_ASPFU9.388e-1457.89Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
HOG1_ASPCL9.388e-1457.89Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
HOG1_ALTBR9.388e-1457.89Mitogen-activated protein kinase HOG1 OS=Alternari... [more]
MK04_MOUSE1.226e-1355.74Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
KSS1_YEAST1.226e-1359.68Mitogen-activated protein kinase KSS1 OS=Saccharom... [more]
HOG1_ARXAD1.226e-1357.89Mitogen-activated protein kinase hog1 OS=Arxula ad... [more]
HOG2_ZYGRO1.601e-1357.89Mitogen-activated protein kinase HOG2 OS=Zygosacch... [more]
HOG1_ZYGRO1.601e-1357.89Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_ZYGRC1.601e-1357.89Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_YEAST1.601e-1357.89Mitogen-activated protein kinase HOG1 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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