EH117788 | Citrus Genome Database

Overview


Name	EH117788
Unique Name	EH117788
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	211

Libraries


Library Name	Type
Different expression profile of FJWC and FJ72-1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_TRIHA (Mitogen-activated protein kinase hog1 OS=Trichoderma harzianum GN=hog1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_TRIAT (Mitogen-activated protein kinase hog1 OS=Trichoderma atroviride GN=hog1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_TORDE (Mitogen-activated protein kinase HOG1 OS=Torulaspora delbrueckii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   94 DIYFVTELQGTDLHRLLQT-RPLEKQFVQYFLYQILRGLKYVHSAGVIHRDLKPSNI 149

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_GLOLA (Mitogen-activated protein kinase HOG1 OS=Glomerella lagenarium GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_GIBZE (Mitogen-activated protein kinase HOG1 OS=Gibberella zeae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_GIBIN (Mitogen-activated protein kinase HOG1 (Fragment) OS=Gibberella intermedia GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   47 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 102

[Close]

BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1

Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   47 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 102

The following BLAST results are available for this feature:

BLAST of EH117788 vs. ExPASy Swiss-Prot

BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190


Match Name	E-value	Identity	Description
HOG1_TRIHA	1.601e-13	56.14	Mitogen-activated protein kinase hog1 OS=Trichoder...	[more]
HOG1_TRIAT	1.601e-13	56.14	Mitogen-activated protein kinase hog1 OS=Trichoder...	[more]
HOG1_TORDE	1.601e-13	57.89	Mitogen-activated protein kinase HOG1 OS=Torulaspo...	[more]
HOG1_NEUCR	1.601e-13	56.14	Mitogen-activated protein kinase hog-1 OS=Neurospo...	[more]
HOG1_MAGGR	1.601e-13	56.14	Mitogen-activated protein kinase HOG1 OS=Magnaport...	[more]
HOG1_KLULA	1.601e-13	57.89	Mitogen-activated protein kinase HOG1 OS=Kluyverom...	[more]
HOG1_GLOLA	1.601e-13	56.14	Mitogen-activated protein kinase HOG1 OS=Glomerell...	[more]
HOG1_GIBZE	1.601e-13	56.14	Mitogen-activated protein kinase HOG1 OS=Gibberell...	[more]
HOG1_GIBIN	1.601e-13	56.14	Mitogen-activated protein kinase HOG1 (Fragment) O...	[more]
HOG1_FUSCU	1.601e-13	56.14	Mitogen-activated protein kinase HOG1 (Fragment) O...	[more]

Pages

Properties


Property Name	Value
Genbank description	fjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT