EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_EURHE (Mitogen-activated protein kinase hog1 OS=Eurotium herbariorum GN=hog1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYSVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_CRYPA (Mitogen-activated protein kinase HOG1 OS=Cryphonectria parasitica GN=HOG1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_BEABA (Mitogen-activated protein kinase HOG1 OS=Beauveria bassiana GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ S + L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_ASHGO (Mitogen-activated protein kinase HOG1 OS=Ashbya gossypii GN=HOG1 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL  TDL++++++ + L ++  QYFLYQ+LRGLKY+HSA VIHRDLKPSN+
Sbjct:   95 DIYFVTELQGTDLHRLLQT-RPLEKQFLQYFLYQILRGLKYVHSAGVIHRDLKPSNI 150          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQS-----LSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DVY+  E     LYQI++  +      L++EH ++ +YQ++R LKYIHSAN+IHRDLKP NL+L
Sbjct:  195 FRDVYVVTEFAGRSLYQILKQQRDYGRRVLTDEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLAL 260          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: KKQ1_YEAST (Probable serine/threonine-protein kinase YKL161C OS=Saccharomyces cerevisiae GN=YKL161C PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = -1
Query:   23 VYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 190
            VY+  ELM+ DL QIIRS Q L + H Q F+YQ+L  LKYIHSANV+H DLKP NL
Sbjct:  104 VYLYEELMECDLSQIIRSEQRLEDAHFQSFIYQILCALKYIHSANVLHCDLKPKNL 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_YARLI (Mitogen-activated protein kinase HOG1 OS=Yarrowia lipolytica GN=HOG1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL++++ + + L ++  QYFLYQ+LRGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLLMT-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: ERK2_DICDI (Extracellular signal-regulated kinase 2 OS=Dictyostelium discoideum GN=erkB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   17 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 193
            D+Y+  E M+TDL+ +IR+ + L E H QY +YQLL+ LKY+HSANV+HRD+KPSNL L
Sbjct:   88 DIYLVFEHMETDLHAVIRA-KILEEIHKQYTIYQLLKALKYMHSANVLHRDIKPSNLLL 145          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_EMENI (Mitogen-activated protein kinase mpkC OS=Emericella nidulans GN=mpkC PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            DVY+  EL+ TDL++++ + + L  +  QYF YQ+LRGLKYIHSA VIHRDLKP NL
Sbjct:   92 DVYLVTELLGTDLHRLL-NGKPLESKFAQYFTYQILRGLKYIHSAGVIHRDLKPGNL 147          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
HOG1_EURHE1.601e-1357.89Mitogen-activated protein kinase hog1 OS=Eurotium ... [more]
HOG1_CRYPA1.601e-1356.14Mitogen-activated protein kinase HOG1 OS=Cryphonec... [more]
HOG1_CHAGB1.601e-1356.14Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
HOG1_BEABA1.601e-1356.14Mitogen-activated protein kinase HOG1 OS=Beauveria... [more]
HOG1_ASHGO1.601e-1357.89Mitogen-activated protein kinase HOG1 OS=Ashbya go... [more]
PMK3_CAEEL2.091e-1350.00Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
KKQ1_YEAST2.091e-1364.29Probable serine/threonine-protein kinase YKL161C O... [more]
HOG1_YARLI2.091e-1356.14Mitogen-activated protein kinase HOG1 OS=Yarrowia ... [more]
ERK2_DICDI2.731e-1359.32Extracellular signal-regulated kinase 2 OS=Dictyos... [more]
MPKC_EMENI3.567e-1359.65Mitogen-activated protein kinase mpkC OS=Emericell... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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