EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F D Y+    M TDL ++++  + LSEE  QY +YQ+L+GLKYIH+A +IHRDLKP NL++
Sbjct:   99 RFHDFYLVMPFMGTDLGKLMKMER-LSEERVQYLVYQMLKGLKYIHAAGIIHRDLKPGNLAI 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:  135 TLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:  135 TLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I  +  L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:   97 TLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK09_MOUSE (Mitogen-activated protein kinase 9 OS=Mus musculus GN=Mapk9 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I  +  L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:   97 TLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I  +  L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:   97 TLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F DVYI  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:  100 EFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F DVYI  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:  100 EFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK08_HUMAN (Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F DVYI  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:  100 EFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T  +F DVY+  ELMD +L Q+I+    L  E   Y LYQ+L G+K++HSA +IHRDLKPSN+
Sbjct:   97 TLDEFQDVYLVMELMDANLCQVIQ--MELDHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MK12_DANRE3.020e-1251.61Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
MK10_MOUSE3.020e-1252.38Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
MK10_HUMAN3.020e-1252.38Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK09_RAT3.020e-1252.38Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_MOUSE3.020e-1252.38Mitogen-activated protein kinase 9 OS=Mus musculus... [more]
MK09_HUMAN3.020e-1252.38Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
MK08_RAT3.020e-1255.00Mitogen-activated protein kinase 8 OS=Rattus norve... [more]
MK08_MOUSE3.020e-1255.00Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MK08_HUMAN3.020e-1255.00Mitogen-activated protein kinase 8 OS=Homo sapiens... [more]
MK08A_CYPCA3.944e-1252.38Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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