EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F ++Y+  ELM+ D++QIIRS Q LS++H Q F+YQ+L GL +IHSA+V+HRDLKP NL
Sbjct:  121 EFNEIYLYEELMECDMHQIIRSGQPLSDQHYQSFIYQVLCGLNFIHSADVLHRDLKPGNL 180          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: NLK_MOUSE (Serine/threonine protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F ++Y+  ELM +DL++II S Q LS +H + FLYQ+LRGLKY+HSA ++HRD+KP NL
Sbjct:  212 FEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNL 270          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: NLK_HUMAN (Serine/threonine protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1
Query:   23 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 199
            F ++Y+  ELM +DL++II S Q LS +H + FLYQ+LRGLKY+HSA ++HRD+KP NL
Sbjct:  212 FEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNL 270          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MAPK1_PNECA (Mitogen-activated protein kinase 1 OS=Pneumocystis carinii GN=MKP1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +F ++Y+  ELM  +L  IIRS+Q L++ H Q F+YQ+L GLKYIHSANV+HRDLKPSNL
Sbjct:   96 KFNELYLYEELMQANLNSIIRSDQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPSNL 155          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14A_DROME (Mitogen-activated protein kinase 14A OS=Drosophila melanogaster GN=Mpk2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F  VY+   LMD DL  IIR  Q LS++H Q+ +YQ+LRGLKYIHSA VIHRDLKPSN+++
Sbjct:  103 FQQVYLVTHLMDADLNNIIRM-QHLSDDHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAV 162          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_RAT (Mitogen-activated protein kinase 14 OS=Rattus norvegicus GN=Mapk14 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   98 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_PANTR (Mitogen-activated protein kinase 14 OS=Pan troglodytes GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   98 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_MOUSE (Mitogen-activated protein kinase 14 OS=Mus musculus GN=Mapk14 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   98 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_HUMAN (Mitogen-activated protein kinase 14 OS=Homo sapiens GN=MAPK14 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   98 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14_CANFA (Mitogen-activated protein kinase 14 OS=Canis familiaris GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = -1
Query:   17 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 202
            +F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LRGLKYIHSA++IHRDLKPSNL++
Sbjct:   98 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MKC1_CANAL2.234e-1558.33Mitogen-activated protein kinase MKC1 OS=Candida a... [more]
NLK_MOUSE2.918e-1557.63Serine/threonine protein kinase NLK OS=Mus musculu... [more]
NLK_HUMAN2.918e-1557.63Serine/threonine protein kinase NLK OS=Homo sapien... [more]
MAPK1_PNECA3.811e-1561.67Mitogen-activated protein kinase 1 OS=Pneumocystis... [more]
MK14A_DROME4.978e-1562.30Mitogen-activated protein kinase 14A OS=Drosophila... [more]
MK14_RAT6.501e-1556.45Mitogen-activated protein kinase 14 OS=Rattus norv... [more]
MK14_PANTR6.501e-1556.45Mitogen-activated protein kinase 14 OS=Pan troglod... [more]
MK14_MOUSE6.501e-1556.45Mitogen-activated protein kinase 14 OS=Mus musculu... [more]
MK14_HUMAN6.501e-1556.45Mitogen-activated protein kinase 14 OS=Homo sapien... [more]
MK14_CANFA6.501e-1556.45Mitogen-activated protein kinase 14 OS=Canis famil... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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