EH117788

Overview
NameEH117788
Unique NameEH117788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length211
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:412..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_NEOFI (Mitogen-activated protein kinase mpkC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mpkc PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+YIA EL+ TDL +++ S + L  +  QYF+YQ+LRGLKYIHSANVIHRDLKP+N+
Sbjct:   92 DIYIATELLGTDLGRLL-SIKPLDSKFSQYFIYQILRGLKYIHSANVIHRDLKPTNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_ASPFU (Mitogen-activated protein kinase mpkC OS=Aspergillus fumigatus GN=mpkC PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+YIA EL+ TDL +++ S + L  +  QYF+YQ+LRGLKYIHSANVIHRDLKP+N+
Sbjct:   92 DIYIATELLGTDLGRLL-SIKPLDSKFSQYFIYQILRGLKYIHSANVIHRDLKPTNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK14B_DANRE (Mitogen-activated protein kinase 14B OS=Danio rerio GN=mapk14b PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = -1
Query:   17 FTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLSL 199
            F DVY+   LM  DL  I++  Q L+++H Q+ +YQ+LR LKYIHSA++IHRDLKPSNL++
Sbjct:  100 FNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRALKYIHSADIIHRDLKPSNLAV 159          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = -1
Query:   23 YQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 205
            ++F+  YI  E M+TDL  ++    +L+EEH + F+YQLLRGLKYIHSANV+HRDLKP+N+
Sbjct:   70 FKFSVAYIVQEYMETDLACLLEQG-TLTEEHAKLFMYQLLRGLKYIHSANVLHRDLKPANI 129          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: HOG1_EMENI (Mitogen-activated protein kinase hog1 OS=Emericella nidulans GN=hog1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 33/57 (57.89%), Postives = 47/57 (82.46%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y   EL+ TDL+++I S++ L ++  QYFLYQ++RGLKY+HSA V+HRDLKPSN+
Sbjct:   92 DIYFVTELLGTDLHRLI-SSRPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNI 147          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: SMK1_YEAST (Sporulation-specific mitogen-activated protein kinase SMK1 OS=Saccharomyces cerevisiae GN=SMK1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = -1
Query:   23 TAYQFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 211
            T+  +  +Y   EL+D DL ++I S+  LSE H +YFLYQ+L GLKYIHSA+VIHRDLKP N+
Sbjct:  110 TSSPYDGLYCYQELIDYDLAKVIHSSVQLSEFHIKYFLYQILCGLKYIHSADVIHRDLKPGNI 172          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_ASPTN (Mitogen-activated protein kinase mpkC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mpkC PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y+  EL+ TDL +++RS + L  +  Q+F+YQL+RGLKYIHSA VIHRDLKPSNL
Sbjct:   91 DIYLVTELLGTDLSRLLRS-KPLENKFAQFFMYQLMRGLKYIHSAGVIHRDLKPSNL 146          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MPKC_ASPOR (Mitogen-activated protein kinase mpkC OS=Aspergillus oryzae GN=mpkC PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = -1
Query:   23 DVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 193
            D+Y+  EL+ TDL +++R+ + L  +  QYF+YQ+LRGLKYIHSA VIHRDLKPSNL
Sbjct:   91 DIYLVTELLGTDLGRLLRA-RPLDNKFAQYFMYQILRGLKYIHSAGVIHRDLKPSNL 146          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK06_RAT (Mitogen-activated protein kinase 6 OS=Rattus norvegicus GN=Mapk6 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +   VYI  E M+TDL  ++     L EEH + F+YQLLRGLKYIHSANV+HRDLKP+NL
Sbjct:  100 ELNSVYIVQEYMETDLANVLEQGPLL-EEHARLFMYQLLRGLKYIHSANVLHRDLKPANL 158          
BLAST of EH117788 vs. ExPASy Swiss-Prot
Match: MK06_PONAB (Mitogen-activated protein kinase 6 OS=Pongo abelii GN=MAPK6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = -1
Query:   23 QFTDVYIAAELMDTDLYQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNL 202
            +   VYI  E M+TDL  ++     L EEH + F+YQLLRGLKYIHSANV+HRDLKP+NL
Sbjct:  100 ELNSVYIVQEYMETDLANVLEQGPLL-EEHARLFMYQLLRGLKYIHSANVLHRDLKPANL 158          
The following BLAST results are available for this feature:
BLAST of EH117788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MPKC_NEOFI5.504e-1463.16Mitogen-activated protein kinase mpkC OS=Neosartor... [more]
MPKC_ASPFU5.504e-1463.16Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK14B_DANRE5.504e-1455.74Mitogen-activated protein kinase 14B OS=Danio reri... [more]
MK04_RAT5.504e-1457.38Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]
HOG1_EMENI5.504e-1457.89Mitogen-activated protein kinase hog1 OS=Emericell... [more]
SMK1_YEAST7.188e-1457.14Sporulation-specific mitogen-activated protein kin... [more]
MPKC_ASPTN7.188e-1461.40Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MPKC_ASPOR7.188e-1461.40Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK06_RAT7.188e-1460.00Mitogen-activated protein kinase 6 OS=Rattus norve... [more]
MK06_PONAB7.188e-1460.00Mitogen-activated protein kinase 6 OS=Pongo abelii... [more]

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Properties
Property NameValue
Genbank descriptionfjfw17 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117788 ID=EH117788; Name=EH117788; organism=Citrus sinensis; type=EST; length=211bp
GACGATGAGTCCTGAGTAACGAGAGATTGCTGGGCTTCAAATCCCGATGA
ATAACATTTGCTGAATGGATATACTTGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCCTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCATGAGTTCCGCAGCAATATAGACATCAGTGAAT
TGGTACGCAGT
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