EY664789

Overview
NameEY664789
Unique NameEY664789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 56/203 (27.59%), Postives = 91/203 (44.83%), Query Frame = 2
Query:   80 AVALRVNADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNI---VSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWSEWSGDQCLDTLYYGEFNNYGPCSGTDNRVTWPGYHVMDENDAY----AFTVSQXIDGQEWLDS 667
            AVA+ V  D +A + C F G QDT++ +  R  ++ C + G ID+IFG+   V + C+I      L     F  ITAQ +   ++ +G      S+         S S   YLGR    +S  +F+++ +   + P GW  W       +  Y E    G  S    RV W     +D+  ++     F++S  ID  +W+ +
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSV---------SGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW-----IDKLHSFYTKQQFSISNFIDQDQWISN 289          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 55/173 (31.79%), Postives = 84/173 (48.55%), Query Frame = 2
Query:   38 DLTIENKAGPEKYQAVALRVNADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFG-NAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWSEWS-GDQCLDTLYYGEFNNYG 550
            +L I N  G   +QA+AL   AD    + C+F+GYQDTL A +  Q Y    + G +D+IFG +A    Q  N+  R+        ITA  +    + +   I   ++ A E    + A    YLGRP   Y+  VF ++ + + I   GW+EWS      + + +GE+ N G
Sbjct:  126 NLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQ--NVDIRVVEGPTSASITANGRSSETDTSYYVINKSTVAAKEG--DDVAEGTYYLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTG 294          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 60/222 (27.03%), Postives = 102/222 (45.95%), Query Frame = 2
Query:   38 DLTIENKAGPEKYQAVALRVNADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFG-NAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWSEWS-GDQCLDTLYYGEFNN-----YGPCSGTDNRVTWPGYHVMDENDAYAFTVSQXI--DGQEWLDSTSI 676
            +L I N  G   +QA+A+   A     + C F+GYQDTL A +  Q Y    + G +D+IFG +A      C+I  R+        ITA  +   ++++   I   ++ A +    +S +   YLGRP   Y+   F ++ + D I   GW+EWS      + + + E+ N      GP +   + +T P             T+S  +  D ++W+D++ I
Sbjct:  125 NLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDI--RVLEGPSSASITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGAEGPRANFSSELTEP------------ITISWLLGSDWEDWVDTSYI 330          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 58/220 (26.36%), Postives = 89/220 (40.45%), Query Frame = 2
Query:   11 VSGVRFLARDLTIENKAGPEKYQAVALRVNADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPL---PGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWSEWSGDQCLDTLYYGEFNNYGPCSGTDNRVTWPGYHVMDENDAYAFTVSQXIDGQEWL 661
            +SG+ F      + N    E   AVA R+  D   +   SF G QDTL+    R +Y+ C + G ID+IFG    + + C +   L +      +  ITA  +  P++  G    +C++             K+ LGR     +  +F  S + D + P GW  W        L + E    G  + T  RV W     + E D +A      ID   W+
Sbjct:  120 ISGITFKNTYNIVPNNKR-EIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVG---------KTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLSLSEVDGFASV--SFIDQDGWI 327          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12
Identity = 36/82 (43.90%), Postives = 45/82 (54.88%), Query Frame = 2
Query:   14 SGVRFLARDLTIENKAGPEKYQAVALRVNADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIV 259
            +G  F+  D+   N   P K   V LRVN D + ++ C    YQD LY H  RQ YRE  +  T+D+I GNAA V Q C IV
Sbjct:  161 NGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQIV 242          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 66/223 (29.60%), Postives = 101/223 (45.29%), Query Frame = 2
Query:    8 SVSGVRFLARDLTIEN--------------KAGPEKYQAVALRV--NADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQL---KDDPNENTGISIQNCSILATEDLYANSASVKSY-LGRPLKIYST--------------TVFLESYIDDFIEPAGWSEWSG-DQCLDTLYYG-------EFNNYG 550
            ++S   F A+ LTI N               +  +  QAVAL V  + D A     S  GYQDTLY    R F+ +C + GT+D+IFG+   +   C++VSR     +   ++  L     + N+  G+ I N  ++   D    S   KSY LGRP    +T              TVFL + +D+ I   GW + SG D+  +T+++        E+ +YG
Sbjct:  116 TISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD----SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYG 332          
BLAST of EY664789 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 66/223 (29.60%), Postives = 101/223 (45.29%), Query Frame = 2
Query:    8 SVSGVRFLARDLTIEN--------------KAGPEKYQAVALRV--NADFAALFICSFSGYQDTLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQL---KDDPNENTGISIQNCSILATEDLYANSASVKSY-LGRPLKIYST--------------TVFLESYIDDFIEPAGWSEWSG-DQCLDTLYYG-------EFNNYG 550
            ++S   F A+ LTI N               +  +  QAVAL V  + D A     S  GYQDTLY    R F+ +C + GT+D+IFG+   +   C++VSR     +   ++  L     + N+  G+ I N  ++   D    S   KSY LGRP    +T              TVFL + +D+ I   GW + SG D+  +T+++        E+ +YG
Sbjct:  116 TISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD----SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYG 332          
The following BLAST results are available for this feature:
BLAST of EY664789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME52_ARATH6.899e-1627.59Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.101e-1331.79Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME_ASPTU3.205e-1327.03Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME66_ARATH5.467e-1326.36Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]
PME57_ARATH7.894e-1243.90Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]
PMEA_ERWCH1.031e-1129.60Pectinesterase A OS=Erwinia chrysanthemi GN=pemA P... [more]
PMEA_DICD31.031e-1129.60Pectinesterase A OS=Dickeya dadantii (strain 3937)... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664789 ID=EY664789; Name=EY664789; organism=Citrus sinensis; type=EST; length=842bp
AATTGCTTCTGTGTCCGGAGTCAGGTTTCTGGCTCGGGACCTAACAATTG
AGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGAGTGAAT
GCAGATTTTGCAGCTTTGTTCATATGCAGCTTCTCTGGTTACCAAGATAC
GTTATATGCACACTCATTTCGTCAGTTTTACCGAGAGTGCGACGTATACG
GAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAGGCATGT
AACATCGTATCTAGACTGCCATTACCAGGGCAATTCACAGTCATCACAGC
ACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCCAAAATT
GTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGTGTTAAA
AGTTACCTAGGCAGGCCCTTGAAGATCTACTCAACAACAGTTTTTCTTGA
GTCCTACATTGATGACTTTATTGAGCCAGCCGGGTGGAGCGAGTGGTCAG
GTGATCAATGCTTGGACACATTGTACTACGGAGAGTTCAATAATTACGGT
CCATGTTCCGGGACCGATAATCGGGTCACTTGGCCCGGGTATCATGTCAT
GGATGAGAATGATGCATATGCTTTTACTGTATCACAGNTAATTGATGGTC
AGGAGTGGCTGGATTCAACTTCAATTCCTTACCAAGATGGGATTTAATCA
CCATCTTTTGTGAAAATTAATTTTTATTTTTATTAAGGTCGATGTAACTA
GAACTCTTGTTTGTATTANTTGGGTTTCTAAAGTAGATATTATGAAATTA
GGTTGACGTAGGAAATGATTTGATCTGTCAATGAAGCCTATG
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