EY664780

Overview
NameEY664780
Unique NameEY664780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664780_ssr463 microsatellite EY664780_ssr463:463..474. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.179e-38
Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*-RWHVYSASAEARSHVNPDYTLKMCMTGLDRKKASVFYKTNE----SSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAESTIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAALHYDIVGDEHGDTFMLDLNGYS*ADKNM 584
            HR FSEEV VL+ +FG        +V+G+P     +WH+Y A+        P  TL+MCMTGLD++KASVF+KT+     S +  MT  SGI++I+P+ +ICD++F+PCGYSMN++ G A STIHVTPEDG ++AS E VG++   +    L++RVL CF P EFS A+     G  H  T+  +LN  +    NM
Sbjct:  135 HRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQ---PMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTI-FGGHGHAGTWAKELNADAYKCNNM 326          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.430e-38
Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*-RWHVYSASAEARSHVNPDYTLKMCMTGLDRKKASVFYKTNE----SSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAESTIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAALHYDIVGDEHGDTFMLDLNGYS*ADKNM 584
            HR FSEEV VL+ +FG        +V+G+P     +WH+Y A+        P  TL+MCMTGLD++KASVF+KT+     S +  MT  SGI++I+P+ +ICD++F+PCGYSMN++ G A STIHVTPEDG ++AS E VG++   +    L++RVL CF P EFS A+     G  H  T+  +LN  +    NM
Sbjct:  135 HRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQ---PMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTI-FGGHGHAGTWAKELNADAYKCNNM 326          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36
Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*-RWHVYSASAEARSHVNPDYTLKMCMTGLDRKKASVFYKTNE----SSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAESTIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR FSEEV VL+ +FG        +V+G+P     +WH+Y A+ +      P  TL+MCMTGLD+ KASVF+KT+     S +  MT  SGI++I+P+ ++CD++F+PCGYSMN++ G A STIHVTPEDG ++AS E  G +   +    +++RVL CF P EFS A+
Sbjct:  128 HRSFSEEVDVLNRYFGHLNSGGNAYVIGDPAKPGQKWHIYYATEQPEQ---PMVTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAV 293          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.476e-36
Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*-RWHVYSASAEARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAM----MTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAESTIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR FSEEV  L+ +FG        +V+G+P     +WHV+ A+        P   L+MCMTGLD+KKA VF+KTN   +      MT  SGI+ I+P+ +ICD++F+PCGYSMN++ G A STIHVTPEDG ++AS E +G +   ++   L++RVL CF P EFS A+
Sbjct:  135 HRSFSEEVAALNRYFGGLKSGGNAYVIGDPARPGQKWHVFYATEYPEQ---PMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAV 300          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19
Identity = 69/195 (35.38%), Postives = 99/195 (50.77%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSASAEARSHVN-PDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAESTIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAALHYDIVGDEHGDTF-MLDLNGYS*ADKNMKI 590
            H  FS+EV  L+  F     D   +VMG+  N   W++Y A       +   + T ++ M  LD      F+K    S+   T +SGI ++LP S I D++FDPCGYSMN +  +   TIH+TPE  C++ S +    N    +   LL +VL  FKP  F+AAL Y   G   GD +   D+N  S A +N  +
Sbjct:  153 HCSFSDEVNFLNKIF-----DGQAYVMGDV-NKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT---NVALADYNQLLAKVLNVFKPGRFTAAL-YAEDGAPCGDPYTAFDVNVPSYAIQNKTV 337          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSASA------------EARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAE-STIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEF 491
            H+ F+EEV  LD  F     +   + +G+  N   W++Y+ S             E     +PD T+++ M  LD +  S+FYK   + +   T  SGI  ILP   I D+ FDPCGYSMN +    E  TIH+TPE+  ++ S E    N    N   L+ +V+  FKP +F
Sbjct:  124 HQGFTEEVTYLDSIFP----NGRSYCLGSM-NLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET---NVALSNYRKLINQVINTFKPGKF 288          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSAS-AEARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAES-TIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR F EE+  L+  F     +   + MG   N+  W++Y+    E+R    PD TL++ M+ LD      FY  +  ++  +T +SGI +++P S I    F+PCGYSMN M+ D    TIH+TPE   ++ S E    N  + +   L+ +V+  FKP +F   L
Sbjct:  127 HRNFQEEIEFLNAIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSAS-AEARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAES-TIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR F EE+  L+  F     +   + MG   N+  W++Y+    E+R    PD TL++ M+ LD      FY  +  ++  +T +SGI +++P S I    F+PCGYSMN M+ D    TIH+TPE   ++ S E    N  + +   L+ +V+  FKP +F   L
Sbjct:  127 HRNFQEEIEFLNAIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSAS-AEARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAES-TIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR F EE+  L+  F     +   + MG   N+  W++Y+    E+R    PD TL++ M+ LD      FY  +  ++  +T +SGI +++P S I    F+PCGYSMN M+ D    TIH+TPE   ++ S E    N  + +   L+ +V+  FKP +F   L
Sbjct:  127 HRNFQEEIEFLNAIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY664780 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   12 HRIFSEEVPVLDGHFGKFGMDSTDFVMGNPDNT*RWHVYSASA-EARSHVNPDYTLKMCMTGLDRKKASVFYKTNESSSAMMTADSGITNILPKSDICDYEFDPCGYSMNSMEGDAES-TIHVTPEDGCNHASLEAVGYNFVRVNTTPLLERVLACFKPDEFSAAL 503
            HR F EE+  L+  F     +   + MG   N+  W++Y+    E+R    PD TL++ M+ LD      FY  +  ++  +T +SGI +++P S I    F+PCGYSMN M+ D    TIH+TPE   ++ S E    N  + +   L+ +V+  FKP +F   L
Sbjct:  127 HRNFQEEIEFLNAIFP----NGAAYCMGRM-NSDCWYLYTLDLPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
The following BLAST results are available for this feature:
BLAST of EY664780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM_ORYSJ1.179e-3845.41S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI3.430e-3845.41S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_HORCH1.882e-3646.75S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_MAIZE5.476e-3646.75S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM_DICDI7.944e-1935.38S-adenosylmethionine decarboxylase proenzyme OS=Di... [more]
DCAM_DROME9.711e-1734.10S-adenosylmethionine decarboxylase proenzyme OS=Dr... [more]
DCAM_HUMAN1.402e-1533.73S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_BOVIN1.831e-1533.73S-adenosylmethionine decarboxylase proenzyme OS=Bo... [more]
DCAM1_MOUSE1.831e-1533.73S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_RAT2.392e-1533.73S-adenosylmethionine decarboxylase proenzyme OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664780 ID=EY664780; Name=EY664780; organism=Citrus sinensis; type=EST; length=794bp
CACACATTTTCCACCGTATCTTCTCTGAGGAAGTACCTGTCCTTGATGGA
CACTTTGGCAAGTTTGGTATGGACAGCACAGATTTTGTCATGGGTAATCC
TGACAACACATAAAGATGGCATGTTTACTCTGCCTCTGCTGAAGCAAGAA
GCCATGTAAACCCAGATTACACTCTAAAGATGTGCATGACTGGTTTGGAC
AGAAAGAAGGCATCTGTCTTCTACAAAACTAATGAAAGCTCATCCGCTAT
GATGACCGCAGACTCTGGCATCACAAATATTCTTCCAAAATCTGATATTT
GTGATTATGAATTCGACCCTTGTGGTTACTCCATGAATAGTATGGAAGGG
GATGCAGAATCTACTATACACGTCACACCTGAAGATGGTTGCAATCATGC
AAGTTTAGAGGCTGTGGGTTATAATTTTGTAAGAGTGAACACGACTCCCT
TGCTTGAGAGGGTGCTTGCTTGCTTCAAACCCGATGAGTTTTCTGCTGCT
CTGCATTATGACATTGTTGGCGATGAACATGGAGACACCTTCATGCTGGA
CTTGAATGGATATTCCTGAGCAGACAAGAATATGAAGATCTCGGTAATAC
TGGCTCGCTGATCTACTACATCTTTACGAGGGCTGATAGCTCCACATCTC
CTAAGTCTATCTTGAAATGCTGTTGGAGCGACGACCAAAATGACCACAGG
ATTGCAGGGAAATANTGTGCATGATATATCATCGCGTCTGGTGTTTGCAT
AGTATNGCTTCACTATATAATGAAACGCGCGATGGTTAATGTAC
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