EH117771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.361e-19 Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = -1 Query: 18 KGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYR--PRRTGERKRKSVRGCIVGSDLAVLSLVVV 224 KGYVF++ GG DK+GFPMKQGVL P RVRLL+ +G +R RR GER+RKSVRGCIV DL+VL+LV+V Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIV 71
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.390e-19 Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 +FKGYVF+++GGND GFPM QGV P RVRLL+ ++P R GERKRKSVRGCIV D+A L L++V Sbjct: 44 EFKGYVFKITGGNDTEGFPMMQGVGAPTRVRLLLDGRSGCFKPSRDGERKRKSVRGCIVAEDIASLQLIIV 114
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.616e-13 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 21 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRR--TGERKRKSVRGCIVGSDLAVLSLVV 230 +FKGY+FR+ GG+DK GFPM GVL RV LL+ +G + R GER+RK+VRGC++ SD+A++++ + Sbjct: 45 EFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTI 116
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.616e-13 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 21 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRR--TGERKRKSVRGCIVGSDLAVLSLVV 230 +FKGY+FR+ GG+DK GFPM GVL RV LL+ +G + R GER+RK+VRGC++ SD+A++++ + Sbjct: 45 EFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTI 116
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6_ENCCU (40S ribosomal protein S6 OS=Encephalitozoon cuniculi GN=RPS6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.616e-13 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = -1 Query: 18 QFKGYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 230 +F+G + ++GG+D +GFPM G L RVR L+SKG + YR RR G R+RKSVRG IV ++ VL+L+++ Sbjct: 29 EFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIIL 99
BLAST of EH117771 vs. ExPASy Swiss-Prot
Match: RS6E_METKA (30S ribosomal protein S6e OS=Methanopyrus kandleri GN=rps6e PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11 Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = -1 Query: 18 GYVFRVSGGNDKRGFPMKQGVLLPHRVRLLMSKGHSYYRPRRTGERKRKSVRGCIVGSDLAVLSLVVV 221 GY +++GG DK GFPM+ + P RVRLL+S G +RP R GER+RK+VRG + D+ ++ V+V Sbjct: 47 GYKLKITGGTDKDGFPMRPDIHGPVRVRLLLS-GPPGFRPERKGERRRKTVRGNTISEDIVQVNTVIV 113 The following BLAST results are available for this feature:
BLAST of EH117771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH117771 ID=EH117771; Name=EH117771; organism=Citrus sinensis; type=EST; length=239bpback to top |