CX672381

Overview
NameCX672381
Unique NameCX672381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GHT8_SCHPO (Probable high-affinity hexose transporter ght8, mitochondrial OS=Schizosaccharomyces pombe GN=ght8 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11
Identity = 45/229 (19.65%), Postives = 104/229 (45.41%), Query Frame = 2 
Query:  257 VLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAW-SLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLV--GT-----VVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTL--QRLRGKNADISMESAHIREYTQTFEMDSKVGIF-YLFQRKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            ++ VG + G +++  + D +G+R ++    +  ++G +    +  +W  + + +   G+ +  ++ + P + +E+ P  +RG     +Q  +T G+ +   +  GT        WR    I  +  ++  IG+ F+PESPR+L  +G+++E    +    +  +  +I     H+ +     EM      +  +      Y   +G+G+ ++Q + G     YY   +F
Sbjct:   64 MVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKDEEALDIMCKNNVLPREHEIIQTEYHVIKTDCEAEMAGGPATWGDILGADIRYRTFLGLGVMSLQQLTGDNYYFYYGFEVF 292
The following BLAST results are available for this feature:
BLAST of CX672381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
GHT8_SCHPO7.620e-1119.65Probable high-affinity hexose transporter ght8, mi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_16F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16F02-L4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672381 ID=CX672381; Name=CX672381; organism=Citrus sinensis; type=EST; length=911bp
TTGATTCTTCTTTCACTTGCACCTGTGAAAAAAACTGGGACACATGGAGA
ATCCTCAACAAAACTCGGAGGAAGGATTAATGCCAAAGTCTTCACCTCCT
CAGCCAAATCCTGCAATAGTTGCAAATGAAGCTGGTCAGGGCAGTGGCTT
CCCAGAGAGTGATAAATCTTCTGCCACACCCGTTGTGGTTCTGAGCACCT
TGGTAGCCATCTGTGGTTCATTTGCTTATGGCTGCACCTATTCAGTATTT
GGCTCTGTATTGACAGTCGGAGGAATAATAGGGTCATTAGTAAATGGGAA
AATAGCAGACCTCGTTGGTCGAAGACGTACTATGTGGCTATCGGAGTTAT
TCTGTATTGTTGGGTGGCTGGCAGTAGCATTCTCCAAGCATGCTTGGTCA
CTTTATCTTGGACGATTTTCACTTGGGATTGGACTTGTACTTATGGCTTA
TGTGATACCTGTATATATCGCAGAAATAACACCGAAGAACATCCGGGGAG
CATTTACAGCAGCTTTTCAGTTCTTGCTTACTTCTGGTCTTTCAGTAATG
TACTTAGTGGGTACTGTTGTTTCCTGGCGAGCCTTGGCTCTAATTGCTGC
TGTTCCATGTCTGTTGCAAATTATTGGTTTGTTCTTCATTCCCGAGTCTC
CAAGATGGCTGGCAAAGGTTGGTAGAGAAAAAGAGCTAGAAACTACTCTA
CAGCGCCTTAGGGGAAAGAATGCGGATATTTCAATGGAATCTGCTCACAT
CAGAGAATATACACAGACCTTTGAGATGGACTCAAAAGTTGGAATTTTTT
ACCTCTTTCAGCGAAAATATGCTTATCCACTCGTAGTTGGAGTTGGATTA
TCAGCAATGCAACCCATTGTAGGAGCAACTGCAATTCAATACTATGCCAG
CTACATATTTT
back to top