CX672381

Overview
NameCX672381
Unique NameCX672381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.805e-28
Identity = 76/224 (33.93%), Postives = 123/224 (54.91%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVV----SWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQRKYAYP-LVVGVGLSAMQPIVGATAIQYYASYIF 910
            S+L +G I GS ++G  +D  GRR+ +++  +  I+G LA AFS+    L   R  LG+ +     ++PVY++E+ P  IRG        ++ +G+ + Y+V  +     +WR +  +AAVP +L +IG+ F+PESPRWL K G E+E    +  +     DI ME A +++     E + K     + + K+  P L++GVGL+  Q  VG   + YYA  IF
Sbjct:   51 SMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIVNYLFTPFEAWRWMVGLAAVPAVLLLIGIAFMPESPRWLVKRGSEEEAR-RIMNITHDPKDIEMELAEMKQ----GEAEKKETTLGVLKAKWIRPMLLIGVGLAIFQQAVGINTVIYYAPTIF 269          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.404e-27
Identity = 70/226 (30.97%), Postives = 117/226 (51.77%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS-----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDS--KVGIFYLFQRKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S L  G  +GS   G +AD  GR RT  L  +   +G    A ++   ++ +GR   GIG+ + + ++P+YI+EI+P  IRGA  +  Q  +  G+    + G  ++     WR +  +A +P +L  IG+ F PESPRWL + G+  E E  ++ L GK   + +    +R+ + + +  S  + G F LF  +Y   + VG  L   Q + G  A+ YY++ +F
Sbjct:  151 SSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAGLPLAANPLWWRTMFGVAVIPSVLLAIGMAFSPESPRWLVQQGKVSEAEKAIKTLYGKERVVEL----VRDLSASGQGSSEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVF 372          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.446e-27
Identity = 70/228 (30.70%), Postives = 122/228 (53.51%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVV-----SWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMD----SKVGIFYLFQRK-YAYPLVVGVGLSAMQPIVGATAIQYYASYI 907
            S+   G I+G+ + G   D +GRR  + +++   ++G + +A + +   L +GR  +G+G+ + +   P+YI+E +P  IRGA  +   FL+T G  + YL+         +WR +  IA +P LLQ + +F +PESPRWL + GRE+E +  L+R+     D+  E   +++  +T  ++     K+ +  L + K     L+ GVGL   Q  VG   + YY+  I
Sbjct:   75 SMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGTWRWMLGIAGIPALLQFVLMFTLPESPRWLYRKGREEEAKAILRRIYSAE-DVEQEIRALKDSVETEILEEGSSEKINMIKLCKAKTVRRGLIAGVGLQVFQQFVGINTVMYYSPTI 301          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.905e-27
Identity = 80/235 (34.04%), Postives = 127/235 (54.04%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYL---GRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVM------YLVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRWL-AKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLF-QRKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  S   VGG+I S   G + D +GR + + ++ +  +VG L + FSK   S  L   GR   G+   L++ +IP+YI EI P  +RGA  A  Q  + +G+ +       +++G    W  L  ++AVP +LQ + LFF PESPR+L  K+  E + + +L+RLRG + DI+ +   +R+  +    + KV I  LF    Y  P++V + L A Q   G   I YY++ IF
Sbjct:   95 WSLSVSSFAVGGMIASFFGGLLGDKLGRIKALLVANILSLVGALLMGFSKLGPSHILIISGRGISGLYCGLISGLIPMYIGEIAPTTLRGAIGALHQLAIVTGILISQIVGLDFILGNHELWHILLGLSAVPAILQCLLLFFCPESPRYLYIKLDEEAKAKKSLKRLRGSD-DITKDITEMRKEREEASNEKKVSIIQLFTNASYRQPILVALMLHAAQQFSGINGIFYYSTSIF 328          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.690e-26
Identity = 74/225 (32.89%), Postives = 119/225 (52.89%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ--RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S + +G  IG+L NG ++  +GR+ ++    +  ++G +  AF+     L   R  LGI + + +Y  P+Y++E+  +N+RG   + +Q ++T G+ + +L  T  S    WRA+  + A+P +L II + F+P SPRWLA+ GR  E E  L+ LR  +     E   IRE      +  K G + LF+  R     + +G+ L AMQ   G   I YYA  IF
Sbjct:   66 SSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRE-----SLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIF 285          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.690e-26
Identity = 74/225 (32.89%), Postives = 119/225 (52.89%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ--RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S + +G  IG+L NG ++  +GR+ ++    +  ++G +  AF+     L   R  LGI + + +Y  P+Y++E+  +N+RG   + +Q ++T G+ + +L  T  S    WRA+  + A+P +L II + F+P SPRWLA+ GR  E E  L+ LR  +     E   IRE      +  K G + LF+  R     + +G+ L AMQ   G   I YYA  IF
Sbjct:   66 SSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRE-----SLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIF 285          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.207e-26
Identity = 72/225 (32.00%), Postives = 120/225 (53.33%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ--RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S + +G  IG+L NG ++  +GR+ ++ +  +  + G +  AF+     L + R  LG+ + + +Y  P+Y++E+  +N+RG   + +Q ++T G+ + +L  T  S    WRA+  + A+P ++ II + F+P SPRWLA+ GR  E E  L+ LR  +     E   IRE      +  K G + LF+  R     + +G+ L AMQ   G   I YYA  IF
Sbjct:   66 SSMMLGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSGNWRAMLGVLALPAVVLIILVIFLPNSPRWLAEKGRHVEAEEVLRMLRDTSEKARDELNEIRE-----SLKLKQGGWALFKVNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIF 285          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.421e-26
Identity = 71/225 (31.56%), Postives = 118/225 (52.44%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR--KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S +  G  +G++ +G ++  +GR++++ +  +  + G L  A + +   L L R  LG+ + + +Y  P+Y++EI P+ IRG+  + +Q ++T G+   YL  T  S    WR +  +  +P +L +IG+FF+P+SPRW A   R  + E  L RLR  +A+   E   IRE  Q      K   + LF+    +   + +GV L  MQ   G   I YYA  IF
Sbjct:   59 SSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQV-----KQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIF 278          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.421e-26
Identity = 71/225 (31.56%), Postives = 118/225 (52.44%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVS----WRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR--KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S +  G  +G++ +G ++  +GR++++ +  +  + G L  A + +   L L R  LG+ + + +Y  P+Y++EI P+ IRG+  + +Q ++T G+   YL  T  S    WR +  +  +P +L +IG+FF+P+SPRW A   R  + E  L RLR  +A+   E   IRE  Q      K   + LF+    +   + +GV L  MQ   G   I YYA  IF
Sbjct:   59 SSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQV-----KQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIF 278          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.385e-26
Identity = 69/224 (30.80%), Postives = 119/224 (53.12%), Query Frame = 2
Query:  254 SVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLV-----GTVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQRKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S + +G I+G+ + G  +D  GRR+ + LS +   VG L  AFS   W+L + R  LG+ +   + +IP Y+AE+ P + RG  ++ FQ ++ +G+ + Y+      G    WR +   AA+P  L  +G   +PESPR+L K G   E    L  +  K+  +++ +  I +  ++ ++ S  G   LF +     L++G+GL+  Q ++G   + YYA  IF
Sbjct:   50 SAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTM-NKHDQVAV-NKEINDIQESAKIVSG-GWSELFGKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIF 270          
The following BLAST results are available for this feature:
BLAST of CX672381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CSBC_BACSU1.805e-2833.93Probable metabolite transport protein csbC OS=Baci... [more]
PLST4_ARATH3.404e-2730.97Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
INT2_ARATH4.446e-2730.70Probable inositol transporter 2 OS=Arabidopsis tha... [more]
GTR2_BOVIN9.905e-2734.04Solute carrier family 2, facilitated glucose trans... [more]
ARAE_ECOLI1.690e-2632.89Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO571.690e-2632.89Arabinose-proton symporter OS=Escherichia coli O15... [more]
ARAE_KLEOX2.207e-2632.00Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
GALP_ECOLI6.421e-2631.56Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL66.421e-2631.56Galactose-proton symporter OS=Escherichia coli O6 ... [more]
XYLT_LACBR8.385e-2630.80D-xylose-proton symporter OS=Lactobacillus brevis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16F02-L4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672381 ID=CX672381; Name=CX672381; organism=Citrus sinensis; type=EST; length=911bp
TTGATTCTTCTTTCACTTGCACCTGTGAAAAAAACTGGGACACATGGAGA
ATCCTCAACAAAACTCGGAGGAAGGATTAATGCCAAAGTCTTCACCTCCT
CAGCCAAATCCTGCAATAGTTGCAAATGAAGCTGGTCAGGGCAGTGGCTT
CCCAGAGAGTGATAAATCTTCTGCCACACCCGTTGTGGTTCTGAGCACCT
TGGTAGCCATCTGTGGTTCATTTGCTTATGGCTGCACCTATTCAGTATTT
GGCTCTGTATTGACAGTCGGAGGAATAATAGGGTCATTAGTAAATGGGAA
AATAGCAGACCTCGTTGGTCGAAGACGTACTATGTGGCTATCGGAGTTAT
TCTGTATTGTTGGGTGGCTGGCAGTAGCATTCTCCAAGCATGCTTGGTCA
CTTTATCTTGGACGATTTTCACTTGGGATTGGACTTGTACTTATGGCTTA
TGTGATACCTGTATATATCGCAGAAATAACACCGAAGAACATCCGGGGAG
CATTTACAGCAGCTTTTCAGTTCTTGCTTACTTCTGGTCTTTCAGTAATG
TACTTAGTGGGTACTGTTGTTTCCTGGCGAGCCTTGGCTCTAATTGCTGC
TGTTCCATGTCTGTTGCAAATTATTGGTTTGTTCTTCATTCCCGAGTCTC
CAAGATGGCTGGCAAAGGTTGGTAGAGAAAAAGAGCTAGAAACTACTCTA
CAGCGCCTTAGGGGAAAGAATGCGGATATTTCAATGGAATCTGCTCACAT
CAGAGAATATACACAGACCTTTGAGATGGACTCAAAAGTTGGAATTTTTT
ACCTCTTTCAGCGAAAATATGCTTATCCACTCGTAGTTGGAGTTGGATTA
TCAGCAATGCAACCCATTGTAGGAGCAACTGCAATTCAATACTATGCCAG
CTACATATTTT
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