CX672381

Overview
NameCX672381
Unique NameCX672381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 6.009e-24
Identity = 69/223 (30.94%), Postives = 114/223 (51.12%), Query Frame = 2
Query:  242 SVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWSLYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQRKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            S FG+V+T+G   G ++ G + D  GR+ ++ L  +  + G+  +  ++  W L  GR   G+   + + V PVYI+EI    +RG   +  Q ++  G+ + YL G V+ WR LA++  VP  L ++ + F+PE+PR+L    R +E    L+ L G  ++   E   I    Q+F       +  L Q     P ++GV L A Q + G  A+ +YA  IF
Sbjct:   70 SWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSLMLLLMCFMPETPRFLLTQHRRQEAMAALRFLWG--SEQGWEDPPIGA-EQSFH------LALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIF 283          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.009e-24
Identity = 76/235 (32.34%), Postives = 121/235 (51.49%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMY------LVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRW-LAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M +  L   V  + + FSK A S   L LGRF +G+   L    +P+Y+ E++P  +RGA     Q  +  G+ +        ++G    W  L  +  VP LLQ I L   PESPR+ L     E   ++ L++LRG NAD++ +   ++E ++    + KV I  LF+   Y  P++  V L   Q + G  A+ YY++ IF
Sbjct:   65 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLAKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNEDLWPLLLSVIFVPALLQCIVLPLCPESPRFLLINRNEENRAKSVLKKLRG-NADVTRDLQEMKEESRQMMREKKVTILELFRSPAYRQPILSAVVLQLSQQLSGINAVFYYSTSIF 298          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 6.009e-24
Identity = 75/235 (31.91%), Postives = 121/235 (51.49%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMY------LVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRW-LAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M +  L   V  + + FSK   S   L LGRF +G+   L    +P+Y+ E++P  +RGA     Q  +  G+ +        ++G    W  L  I  +P LLQ I L F PESPR+ L     E   ++ L++LRG  AD++ +   ++E ++    + KV I  LF+   Y  P+++ V L   Q + G  A+ YY++ IF
Sbjct:   65 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRG-TADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIF 298          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 81/261 (31.03%), Postives = 128/261 (49.04%), Query Frame = 2
Query:  161 DKSSATPVVVLSTLVAICGSFAYGCTYSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYL------VGTVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKE-LETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ-RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +KS   P  VL T +           +S+  ++ +VGG+IGS   G   +  GRR +M +  L  + G   + F K A S   L LGR  +G+   L    +P+YI EI+P  +RGAF    Q  +  G+ V  +      +GT   W  L     +P +LQ   L F PESPR+L    +E+E  +  LQRL G   D+S +   +++ +     + +V +  LF+ R Y  P+++ + L   Q + G  A+ YY++ IF
Sbjct:   48 EKSENLPTEVLLTSL-----------WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAALPFCPESPRFLLINRKEEENAKEILQRLWG-TQDVSQDIQEMKDESARMAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIF 296          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 74/235 (31.49%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMY------LVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRW-LAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M +  L   V  + + FSK   S   L LGRF +G+   L    +P+Y+ E++P  +RGA     Q  +  G+ +        ++G    W  L  +  +P LLQ I L F PESPR+ L     E   ++ L++LRG  AD++ +   ++E  +    + KV I  LF+   Y  P+++ V L   Q + G  A+ YY++ IF
Sbjct:   65 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNADLWPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRG-TADVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIF 298          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 72/235 (30.64%), Postives = 121/235 (51.49%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMY------LVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRW-LAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ-RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M +  L   +  + + FSK   S   L LGRF +G+   L    +P+Y+ E++P  +RGA     Q  +  G+ +        ++G    W  L  +  +P LLQ + L F PESPR+ L     E   ++ L++LRG  AD++ +   ++E ++    + KV I  LF+   Y  P+++ V L   Q + G  A+ YY++ IF
Sbjct:   24 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFISAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNEELWPLLLSVIFIPALLQCVLLPFCPESPRFLLINRNEENRAKSVLKKLRG-TADVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIF 257          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 1.025e-23
Identity = 74/235 (31.49%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMY------LVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRW-LAKVGREKELETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M +  L   V  + + FSK   S   L LGRF +G+   L    +P+Y+ E++P  +RGA     Q  +  G+ +        ++G    W  L  +  +P LLQ I L F PESPR+ L     E   ++ L++LRG  AD++ +   ++E  +    + KV I  LF+   Y  P+++ V L   Q + G  A+ YY++ IF
Sbjct:   65 WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVAAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNADLWPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRG-TADVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIF 298          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR5_SHEEP (Solute carrier family 2, facilitated glucose transporter member 5 OS=Ovis aries GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.339e-23
Identity = 89/300 (29.67%), Postives = 140/300 (46.67%), Query Frame = 2
Query:  152 PESDKSSATPVVVLSTLVAICGS-FAYGCT-----------------------------------YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVMYLVG------TVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKE-LETTLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQ-RKYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            P   +   TPV+VL+TL+A  GS F YG                                     +SV  S+   GG +GSL+ G + + +GR+ T+  + +F IV  L + FS  A S   + + R  +GI   L + V+P+Y+ E+ PKN RGA     Q  +T G+ V  + G          W  L  +  +P +LQ++ L F PESPR+L    +++E  +  L+RLRG + D+  E   I E  +  +    + +  LF+ R   + ++  + L A Q + G  AI YYA  I+
Sbjct:    6 PVKREGRLTPVIVLATLIAAFGSSFQYGYNVATINSPSEFMKDFYNYTYYDRVGEYMNEFYLTLLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSDLAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEEAAKRALRRLRGWH-DVDAEIEEILEEDRAEKAAGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIY 304          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.339e-23
Identity = 78/236 (33.05%), Postives = 123/236 (52.12%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVM------YLVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELETT--LQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M L  L  I+G   + F+K A S   L LGR  +GI   L    +P+YI E++P  +RGAF    Q  +  G+ V       +++G+   W  L  +  +P +LQ   L F PESPR+L  + R++E + T  LQRL G   D+  E   +++ +     + +V +  LF+   Y  PL++ V L   Q   G  A+ YY++ IF
Sbjct:   63 WSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFLL-INRKEEDQATEILQRLWG-TPDVIQEIQEMKDESIRMSQEKQVTVLELFKSPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIF 296          
BLAST of CX672381 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.339e-23
Identity = 75/235 (31.91%), Postives = 122/235 (51.91%), Query Frame = 2
Query:  239 YSVFGSVLTVGGIIGSLVNGKIADLVGRRRTMWLSELFCIVGWLAVAFSKHAWS---LYLGRFSLGIGLVLMAYVIPVYIAEITPKNIRGAFTAAFQFLLTSGLSVM------YLVGTVVSWRALALIAAVPCLLQIIGLFFIPESPRWLAKVGREKELET-TLQRLRGKNADISMESAHIREYTQTFEMDSKVGIFYLFQR-KYAYPLVVGVGLSAMQPIVGATAIQYYASYIF 910
            +S+  ++ +VGG+IGS   G   +  GRR +M L  L  I+    + F+K A S   L LGR  +GI   L    +P+YI E++P  +RGAF    Q  +  G+ V       +++G+   W  L  +  +P +LQ   L F PESPR+L    +E++  T  LQRL G  +D+  E   +++ +     + +V +  LF+   Y  PL++ + L   Q + G  A+ YY++ IF
Sbjct:   63 WSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLLAIIAGCLMGFAKIAESVEMLILGRLLIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQIFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFLLINKKEEDQATEILQRLWG-TSDVVQEIQEMKDESVRMSQEKQVTVLELFRSPNYVQPLLISIVLQLSQQLSGINAVFYYSTGIF 296          
The following BLAST results are available for this feature:
BLAST of CX672381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
GTR8_HUMAN6.009e-2430.94Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT6.009e-2432.34Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN6.009e-2431.91Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA1.025e-2331.03Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT1.025e-2331.49Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG1.025e-2330.64Solute carrier family 2, facilitated glucose trans... [more]
GTR1_MOUSE1.025e-2331.49Solute carrier family 2, facilitated glucose trans... [more]
GTR5_SHEEP1.339e-2329.67Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT1.339e-2333.05Solute carrier family 2, facilitated glucose trans... [more]
GTR3_MOUSE1.339e-2331.91Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16F02-L4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672381 ID=CX672381; Name=CX672381; organism=Citrus sinensis; type=EST; length=911bp
TTGATTCTTCTTTCACTTGCACCTGTGAAAAAAACTGGGACACATGGAGA
ATCCTCAACAAAACTCGGAGGAAGGATTAATGCCAAAGTCTTCACCTCCT
CAGCCAAATCCTGCAATAGTTGCAAATGAAGCTGGTCAGGGCAGTGGCTT
CCCAGAGAGTGATAAATCTTCTGCCACACCCGTTGTGGTTCTGAGCACCT
TGGTAGCCATCTGTGGTTCATTTGCTTATGGCTGCACCTATTCAGTATTT
GGCTCTGTATTGACAGTCGGAGGAATAATAGGGTCATTAGTAAATGGGAA
AATAGCAGACCTCGTTGGTCGAAGACGTACTATGTGGCTATCGGAGTTAT
TCTGTATTGTTGGGTGGCTGGCAGTAGCATTCTCCAAGCATGCTTGGTCA
CTTTATCTTGGACGATTTTCACTTGGGATTGGACTTGTACTTATGGCTTA
TGTGATACCTGTATATATCGCAGAAATAACACCGAAGAACATCCGGGGAG
CATTTACAGCAGCTTTTCAGTTCTTGCTTACTTCTGGTCTTTCAGTAATG
TACTTAGTGGGTACTGTTGTTTCCTGGCGAGCCTTGGCTCTAATTGCTGC
TGTTCCATGTCTGTTGCAAATTATTGGTTTGTTCTTCATTCCCGAGTCTC
CAAGATGGCTGGCAAAGGTTGGTAGAGAAAAAGAGCTAGAAACTACTCTA
CAGCGCCTTAGGGGAAAGAATGCGGATATTTCAATGGAATCTGCTCACAT
CAGAGAATATACACAGACCTTTGAGATGGACTCAAAAGTTGGAATTTTTT
ACCTCTTTCAGCGAAAATATGCTTATCCACTCGTAGTTGGAGTTGGATTA
TCAGCAATGCAACCCATTGTAGGAGCAACTGCAATTCAATACTATGCCAG
CTACATATTTT
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