CX672346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: IPI3_CANAL (Pre-rRNA-processing protein IPI3 OS=Candida albicans GN=IPI3 PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17 Identity = 50/165 (30.30%), Postives = 92/165 (55.76%), Query Frame = 2 Query: 383 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWS---LLTVFEECESQRASHLYLHSFTGHTLRITDIVIG--YGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIALDPAEHVFYAGSRDG---SIYIAALNAES 853 +AGG +SG +Y+WE++SG LL AHY+ +T + S G+FLI+G ED +W+ L++++++ + Q + + T +TL +TD+ + + + + SED T +++ ++ LL + PS + I DPA Y G +G SI + ++N+ + Sbjct: 123 LAGGSKSGKLYIWELSSGNLLCVRDAHYQGITTIKGSSCGTFLITGGEDARCLVWNLAELISIYDKSDHQVKPYWQI---TDNTLPLTDLCLNDTHNINDLKLYTTSEDSTVRIYDIVTKSLLTTFILPSSAECITKDPANRALYVGLNNGLVRSIPLYSINSHT 284
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: IPI3_LODEL (Pre-rRNA-processing protein IPI3 OS=Lodderomyces elongisporus GN=IPI3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16 Identity = 48/162 (29.63%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 383 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVF------------EECESQRASHLYLHSFTGHTLRITDIVIGYGG--VSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIALDPAEHVFYAGSRDGSI 826 + GG + G +Y+WE+ASG LL AHY+ +T + S G+FL++G ED + +W+L + + + S +S T +TL ITD + G + +AS+D T +++ + + L + P + +A DPA YAG +G I Sbjct: 129 LCGGSKLGKLYIWELASGDLLCVKEAHYQGITRIDLSLCGTFLVTGGEDARIMVWNLADLIAIYGQAGLINETDSSSTVNRSGKPYYSITDNTLPITDFTLNQVGNLADLKLYTASKDSTVRIYDITTKQQLTTFILPQPVTCLARDPANRQLYAGLANGLI 290
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14 Identity = 59/205 (28.78%), Postives = 89/205 (43.41%), Query Frame = 2 Query: 284 SILYWSWSKPQVEVK----SLPAEPIKP-----------------IAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVID---AIALDPAEHVFYAGSRDGSI 826 S L W W+ P+ ++ + P+E P +A + G+ +AGG I++W+VASG L H V + FS DG+ L SGS+D VR+W + E F GHT + DI G + + S S D T ++W++ G + V D A+A P + +GSRDG+I Sbjct: 420 SFLVWQWTLPETPLRPDSSTAPSESADPHELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERA-----------VFEGHTHYVLDIAFSPDG--SMVASGSRDGTARLWNVATG--TEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTI 609 HSP 2 Score: 72.0182 bits (175), Expect = 4.797e-12 Identity = 54/204 (26.47%), Postives = 91/204 (44.61%), Query Frame = 2 Query: 110 LIASSSVADAGIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWSK-PQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSL 718 ++AS S D W++ +G E K + +A + +S R+ G+I W + + +V PAE + +A + G+ + G S +++W+VASG L + H V + FS DG+ L SGS+D +R+W + E + GHT + + G T+ SASED T ++W + Sbjct: 557 MVASGS-RDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRD------GTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDS-TVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHT-----------TLEGHTEPVHSVAFHPEG--TTLASASEDGTIRIWPI 739
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: IPI3_ASHGO (Pre-rRNA-processing protein IPI3 OS=Ashbya gossypii GN=IPI3 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14 Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 2 Query: 125 SVADAGIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWSKPQVEVKSLPA-EPIKPIAANSHGTYIAGGGQ-----------SGDIYMWEVASGRLLK-KWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIG--YGG--VSATIVSASEDRTCKVWSLL----KGRLLRNIVFPSVIDAIALDPAEHVFYAGSRDGS 823 + A +G C G LR + AS P+ +G + L + + + S S SK + + LP E + +A + T AG Q SG +Y+WE SG+LL K AHY+A+T + +G ++++ D + IW ++ E E + L+ HTL ITD + + G +++ + + SED T + + L + +LL FP + +IALDPA+ Y G+R+G+ Sbjct: 8 TTAVSGTVCQVHSVGQANLR-QCAASTPNSAVLMGDKLLVAQANKALINVYSVD----SRSKKEALEQRLPLPEQLSCLAVVENHTGDAGVHQQLPYLLLGSTPSGKLYVWEAGSGKLLTVKAMAHYQAITKMQAIINGKYVVTAGADSRLIIWQTASLVLEEEPKP-----LYVLHDHTLAITDFAVSNAHNGKYLNSKLYTVSEDMTVRCYQLSSQLEQPQLLATFTFPLALTSIALDPADRCLYVGTREGA 251
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13 Identity = 46/161 (28.57%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 347 IKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIV-FPSVIDAIALDPAEHVFYAGSRDGSI 826 + +A N G+ +A G + +WE++S + L + H V+ + FS DG+ L SGS+D VR+WS+ + EC L++F GHT + ++ G A + S S D+T ++WS+ G+ L + + + +I P + +GS D ++ Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISS--GEC---------LYTFLGHTNWVGSVIFSPDG--AILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTV 1434 HSP 2 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 42/168 (25.00%), Postives = 78/168 (46.43%), Query Frame = 2 Query: 347 IKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIV-FPSVIDAIALDPAEHVFYAGSRDGSIYIAALNA 847 + + N G+ +A G + +WE+ S + L + H V +VF+ DGS L SGS D VR+W + +S LH+F GHT + + G + + S S D+T ++W + + L S + ++ P + +GS D ++ + ++++ Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDI-----------SSSKCLHTFQGHTNWVNSVAFNPDG--SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISS 1357 HSP 3 Score: 68.9366 bits (167), Expect = 4.061e-11 Identity = 41/127 (32.28%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 356 IAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLL 736 +A + G A G G + WE A+G+ L H V + FSQDG L SGS+D VR+W + +S L +F GHT R+ +V + S + S S D+T ++W + G L Sbjct: 870 VAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDI-----------SSGQCLKTFKGHTSRVRSVV--FSPNSLMLASGSSDQTVRLWDISSGECL 983
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: PWP2_SCHPO (Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe GN=SPBC713.04c PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13 Identity = 48/166 (28.92%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 329 SLPAEPIKPIAANSHGTYIA-GGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVI--DAIALDPAEHVFYAGSRD 817 S+ I + NS G +IA G + G + +WE S + K +HY A++ L +S DG +I+G++DG +++W + + F + +FT HT ++ + G + S+S D + + W L++ R R PS + IA+DP+ + AGS+D Sbjct: 293 SITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGF-----------CIVTFTQHTSAVSGLCFSKRG--NVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQD 445
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13 Identity = 68/262 (25.95%), Postives = 120/262 (45.80%), Query Frame = 2 Query: 77 NKLVKSIKMELLIA-SSSVADAGIGCWD---LESGAEQLRYKSCA-SPPHGL-------ACVGQRFLASSQLREQPSASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSH--GTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPS-VIDAIALDPAEHVFYAGSRD 817 N + S K++ ++A SS+V+ +G L +G E R A S P+ + + VG SS+ R + SGS+ W ++ +++L + + H G Y+A G +I +W+V + ++ H +AV CL FS DG +L S S+D V++W L+ + + FT HT + V+ + + S S DRT K+W L K ++ + + V+ ++ +P Y+GS + Sbjct: 5 NTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKI-LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI-----------AGKMITEFTSHTSAVN--VVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: IPI3_CANGA (Pre-rRNA-processing protein IPI3 OS=Candida glabrata GN=IPI3 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 2 Query: 383 IAGGGQSGDIYMWEVASGRLLK-KWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIG--YGGVSAT----IVSASEDRT--CKVWSLLKG------------------RLLRNIVFPSVIDAIALDPAEHVFYAGSRDG 820 + G G IY WE+ SG LL K AHY+ +T + DG + I+ +D V +W + S+ LH H L + DI + +G +T + +ASED T C +S L+G RLL FP+ I+A++LDPA+ Y G+ +G Sbjct: 104 LLGSTDGGKIYCWELNSGALLSVKQMAHYQGITKIKSFMDGKYFITSGKDSRVIVWQTIDFVSNNASEPKPICILHD---HNLTVNDIAVSMTHGANMSTSGAKLFTASEDSTVRCYDFSFLRGDFRKNRKSQEQDQKMYQPRLLATFTFPAAIEAMSLDPADRALYVGTSEG 273
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11 Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 2 Query: 317 VEVKSLPAEPIKPIAANSHGTYIA-GGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVI--DAIALDPAEHVFYAGSRD 817 ++ S+ P+ ++ N G ++A G + G + ++E S + K H+ + L +S DGS +++ SEDG +++W + + F L +F HT +T + G + S+S D T + W L++ R R I + +A+DP+ V AGS D Sbjct: 295 IQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGF-----------CLATFEEHTSSVTAVQFAKRG--QVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLD 451
BLAST of CX672346 vs. ExPASy Swiss-Prot
Match: PWP2_PONAB (Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11 Identity = 43/166 (25.90%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 329 SLPAEPIKPIAANSHGTYIAGGGQS-GDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVF--PSVIDAIALDPAEHVFYAGSRD 817 S+ + I +A NS G +IA G G + +WE S + K H+ ++ L +S DG ++++G +DG V++W+ L+ F +FT H+ +T + + +V++S D T + + L + R R P+ +A+D + + AG++D Sbjct: 324 SISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGF-----------CFVTFTEHSSGVTGVT--FTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQD 476 The following BLAST results are available for this feature:
BLAST of CX672346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672346 ID=CX672346; Name=CX672346; organism=Citrus sinensis; type=EST; length=860bpback to top |