CX672343

Overview
NameCX672343
Unique NameCX672343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 65/194 (33.51%), Postives = 96/194 (49.48%), Query Frame = -2
Query:  265 TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGT-KMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWV 834
            T+  ++FL R  A   PF ++ +  +F    ++P +  A+ +  T+ +C+    KGE K C TS E MIDF+ + LG  +   ST +  G  +        G+       SV CH+  +PY V+YCH+    R Y   +     TK K     A+CH DTSAWN  H AF  L  KPG   +CH++    + WV
Sbjct:  150 TTARSSFLPRSIADRIPFKAEAVKSLFG---LEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVRSTVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQ-TKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWV 339          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: EA92_VICFA (Embryonic abundant protein USP92 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  259 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 690
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V PGTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: EA30_VICFA (Embryonic abundant protein VF30.1 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  259 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 690
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V PGTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: SVF30_VICFA (Unknown seed protein 30.1 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  259 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 690
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V  GTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTLGTVPVCHFIGNKAAAWVPN 259          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: EA87_VICFA (Embryonic abundant protein USP87 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  259 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 690
            C  P    E K+C +SL+SMID   S  G + ++AIS+        Q   +   VK++  D +V+CH+ N+   VF CH  + T AY+V L  +DGTK KA  VCH DT   NP+ L ++ L+V  GTVP+CHF+      WVPN
Sbjct:  120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTLGTVPVCHFIGNKAAAWVPN 259          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = -2
Query:  271 FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTE--VKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTSAWNPKHLAFQVLKVKPG-----TVPICHFLPEDHIV 816
            FL R  A   PF +  +  +F      PG+   +++ +T+ EC  P  +GE K CATS E ++DF+   LG +V A +TE     G  ++   +A         +SV CH+  +PY V+YCH+  T R Y   +   D  +      A+CH DTS W+P H AF  L  KPG     T  IC  + +   V
Sbjct:  503 FLPRDIAAKIPFDAAAVSALFG---AAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGKKVDPTKFICFIMQDGEFV 690          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.182e-23
Identity = 68/158 (43.04%), Postives = 89/158 (56.33%), Query Frame = -2
Query:  424 PGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE----QKYCATSLESMIDFSTSKLG-KSVQAISTEV---KKGTKMQTYTIAAGVKQMA--ADKSVVCHKQNYPYAVFYCHATQTTRAYMVP 867
            PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   + GE    + YCATSLESM++F  S LG + V A+STEV      T  Q Y + A V+ +A      V CH   Y YAVF  H  +      VP
Sbjct:   73 PGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEA-VRPVAVPGGDMVACHGMPYAYAVFGLHGLKGAGGGRVP 229          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP4_ORYSJ (BURP domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=BURP4 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.377e-22
Identity = 63/195 (32.31%), Postives = 99/195 (50.77%), Query Frame = -2
Query:  259 FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECED---PGIKGEQKY--CATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGT---KAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 816
            F+ +    + PF    +  I   F + PGS +A  + +T++ C +    G  GE+    CATS E+++DF+ S LG S     T +  G + + Y +AA GV ++  D  V CH   Y Y V+YCH      A  V L          A A AVCH +T+ W+  +  F++LK   G   ICH++P+ +++W+ N
Sbjct:  288 FIYKDKGDAVPFDLRAMDAILAMFGILPGSDKAAQVADTLRACSELTAAGGGGEEPRACCATSREAVLDFAASALGTSAPRAVTTLVHGREPRRYVVAADGVARIGGDAVVACHPMPYLYEVYYCHRPADAVALRVDLHAVADVGLGGATAVAVCHVNTTTWDSAY--FELLKASRGDA-ICHYMPQGYVLWLAN 479          
The following BLAST results are available for this feature:
BLAST of CX672343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
BURPG_ORYSJ3.872e-2533.51BURP domain-containing protein 16 OS=Oryza sativa ... [more]
EA92_VICFA5.057e-2542.07Embryonic abundant protein USP92 OS=Vicia faba PE=... [more]
EA30_VICFA5.057e-2542.07Embryonic abundant protein VF30.1 OS=Vicia faba PE... [more]
SVF30_VICFA7.303e-2441.38Unknown seed protein 30.1 OS=Vicia faba PE=2 SV=1[more]
EA87_VICFA7.303e-2441.38Embryonic abundant protein USP87 OS=Vicia faba PE=... [more]
BURPE_ORYSJ2.125e-2333.51BURP domain-containing protein 14 OS=Oryza sativa ... [more]
BURP1_ORYSJ6.182e-2343.04BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP4_ORYSJ1.377e-2232.31BURP domain-containing protein 4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672343 ID=CX672343; Name=CX672343; organism=Citrus sinensis; type=EST; length=871bp
GATCACAGGGATTTCTAATAGATTCACCAGCCAGCCGCAAAGTAAGACTG
TGAAGATAGCTCCATAAGTAGATAAGATAAATACTAGGCACACAAGTTTT
GAAGTACAGCAAGCTTAATGTATGCATAACAAATTGAACTGGGTATTCAA
AGTAAATTATTGTACAACTAAATGGATAACTGCTTGAACTGACTGATTCA
AACTCTGCTGATTAAGTAGATGGGATAAGAGGATCAAATTCTATTCTCCA
GTCTTCTTATTGGGAACCCAGACAATGTGATCCTCAGGAAGGAAGTGACA
TATAGGAACAGTTCCTGGCTTAACTTTGAGCACTTGAAAAGCTAAATGCT
TGGGGTTCCATGCTGATGTATCTGTGTGGCAGACTGCTGCTGCTTTGGCT
TTTGTCCCATCAGCACCTTCCAAGGGAACCATGTAAGCCCTTGTGGTTTG
TGTTGCATGGCAGTAGAATACAGCATATGGATAGTTCTGCTTATGGCACA
CTACTGATTTGTCAGCTGCCATCTGCTTCACTCCAGCTGCGATTGTATAT
GTCTGCATCTTGGTTCCTTTTTTTACCTCCGTAGAAATTGCCTGAACACT
CTTTCCAAGCTTAGAAGTGCTGAAGTCAATCATTGACTCCAGTGAAGTTG
CACAATATTTCTGCTCTCCTTTAATGCCAGGGTCTTCACACTCTTTGATT
GTGTTCTGCATTATTTCAGCTTCAACTGATCCAGGTTTCACGGAAAACTG
GTTAAAGATCTCAGGCAATTTGTCAGACGAGAAAGGAGTTGATTTGGCAG
CTTGGCGAGATAAGAAAGTTGCTCCATTTGAAGTTTGAGTGAAGTGCAAG
TTCATCTTCATGCCAGGATGC
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