CX672341

Overview
NameCX672341
Unique NameCX672341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD23_XENLA (ER lumen protein retaining receptor 3 OS=Xenopus laevis GN=kdelr3 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.371e-45
Identity = 68/164 (41.46%), Postives = 99/164 (60.37%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            +++  +S YNTVMK+IFL  ++  V+ +  +  +R+SY+ + DTFR  F          L N  FT  E++WTFS+YLE+VAILPQL ++ +T   +++T  Y+FFLG YR LY+ NW++RY TE  Y   I  +SG+VQT+ Y D            K L LP
Sbjct:   51 LFTVFISPYNTVMKIIFLACAYVTVYLI--YGKLRKSYDSENDTFRLEFLLVPVIGLSFLENYEFTPLEILWTFSIYLESVAILPQLFMISKTGEAESITTHYLFFLGLYRVLYLANWIWRYHTEKFY-DQIAVVSGVVQTIFYFDFFYLYVTKVLKGKKLSLP 211          

HSP 2 Score: 75.8702 bits (185), Expect = 2.371e-45
Identity = 34/56 (60.71%), Postives = 48/56 (85.71%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            NIFR+ GD++HL ++++LLLK+   KSC+G+S K+Q L+ALVFTTRYLD+FT F+S
Sbjct:    2 NIFRILGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFIS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.091e-45
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = -1
Query:  221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658
            ++S  +SLYNT MK+ FL ++++ V+ M      R +Y ++ DTFR             LIN +F   E++WTFS+YLEAVAILPQL LLQ T + + +T  Y+F LG+YR LYI NW+YRY+TE  Y   I  ++G+VQT+LYAD
Sbjct:   51 LFSTYISLYNTTMKITFLAATYATVYLMFFK--FRSTYMRESDTFRVELLIVPAAILALLINHDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTE-DYFDPIVVVAGIVQTVLYAD 193          

HSP 2 Score: 73.559 bits (179), Expect = 3.091e-45
Identity = 31/57 (54.39%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            NIFR++ DM+HL ++++LLLKI   +SCSG+S ++Q L+ALVFT RYLD+F+ ++S+
Sbjct:    2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD22_XENLA (ER lumen protein retaining receptor 2 OS=Xenopus laevis GN=kdelr2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.091e-45
Identity = 64/167 (38.32%), Postives = 102/167 (61.08%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVW--YMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +SLYNT MK+I++G +++ V+  YM+     + +Y+ + DTFR  F          L+N +F+  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+FFLG YR LY+ NW++R+  E  +   I  ++G+VQT+LY D            K L LPA
Sbjct:   51 LFTSFISLYNTSMKVIYMGCAYATVYLIYMKF----KATYDGNHDTFRVEFLVVPVGGLSVLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLFNWIWRFSFE-GFFDLIAIVAGVVQTILYCDFFYLYVTKVLKGKKLSLPA 212          

HSP 2 Score: 79.7221 bits (195), Expect = 3.091e-45
Identity = 34/57 (59.65%), Postives = 50/57 (87.72%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FRL+GD+ HLA++++LLLKI   +SC+G+S K+Q L+A+VFTTRYLD+FT F+S+
Sbjct:    2 NVFRLSGDLCHLAAIIILLLKIWNSRSCAGISGKSQLLFAMVFTTRYLDLFTSFISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD22_DANRE (ER lumen protein retaining receptor 2 OS=Danio rerio GN=kdelr2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.028e-45
Identity = 62/165 (37.58%), Postives = 101/165 (61.21%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            + +  +SLYNT MK+I++G +++ V+ +  ++  R +Y+ + DTFR  F          L+N +F+  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++R++ E  +   I  ++G+VQT+LY D            K L LPA
Sbjct:   51 LLTSFISLYNTCMKVIYIGCAYATVYLI--YAKFRATYDGNHDTFRAEFLVVPVGGLAFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFCLGVYRALYLFNWIWRFYFE-GFFDMIAIVAGVVQTILYCDFFYLYVTKVLKGKKLSLPA 212          

HSP 2 Score: 78.5666 bits (192), Expect = 4.028e-45
Identity = 35/57 (61.40%), Postives = 49/57 (85.96%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            NIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+ T F+S+
Sbjct:    2 NIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQILFALVFTTRYLDLLTSFISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.842e-45
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = -1
Query:  221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658
            +++   SLYNTVMK++FL  S   V+ M      + +Y+++ DTFR  F          +IN  F F EVMWTFS+YLEAVAI+PQL +L RT N + +T  Y+F LG+YR LYI NWVYRY+TE  +   I  ++G+VQT+LYAD
Sbjct:   51 LFTSFYSLYNTVMKVLFLAGSIGTVYLMWVK--FKATYDRNNDTFRIEFLVIPSIILALIINHEFMFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYIFNWVYRYYTE-SFFDPIAVVAGIVQTVLYAD 193          

HSP 2 Score: 65.0846 bits (157), Expect = 6.842e-45
Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            NIFR+  D+ H  ++++LLLKI   +SC G+S ++Q L+A+ F TRYLD+FT F S+
Sbjct:    2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 6.842e-45
Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = -1
Query:  221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658
            +++   S YNT MK+ +L +SF  V+ M   +  + +Y+++ D+FR  F          LIN  F F EVMWTFS+YLEAVAI+PQL +L RT N + +T  Y+F LG+YR LYILNWVYRY+TE  +   I  ++G+VQT+LYAD
Sbjct:   51 LFTNFFSFYNTAMKIFYLVASFGTVYLM--WAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYTE-SFFDPISVVAGIVQTVLYAD 193          

HSP 2 Score: 66.6254 bits (161), Expect = 6.842e-45
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            N+FR   D+ H  +++VLLLKI   +SC G+S ++Q L+ALVF TRYLD+FT+F S
Sbjct:    2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD22_XENTR (ER lumen protein retaining receptor 2 OS=Xenopus tropicalis GN=kdelr2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.842e-45
Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVW--YMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            + +  +SLYNT MK+I++G +++ V+  YM+     + +Y+ + DTFR  F          L+N +F+  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+FFLG YR LY+ NW++RY  E  +   I  ++G+VQT+LY D            K L LPA
Sbjct:   51 LLTSFISLYNTSMKVIYIGCAYATVYLIYMKF----KATYDGNHDTFRVEFLVVPVGGLSVLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLFNWIWRYSFE-GFFDLIAIVAGVVQTILYCDFFYLYVTKVLKGKKLSLPA 212          

HSP 2 Score: 78.5666 bits (192), Expect = 6.842e-45
Identity = 34/57 (59.65%), Postives = 50/57 (87.72%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FRL+GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+ T F+S+
Sbjct:    2 NVFRLSGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLLTSFISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD23_XENTR (ER lumen protein retaining receptor 3 OS=Xenopus tropicalis GN=kdelr3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.162e-44
Identity = 66/164 (40.24%), Postives = 98/164 (59.76%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            +++  +S YNTVMK++FL  ++  V+ +  +   R++Y+ + DTFR  F          L N  FT  E++WTFS+YLE+VAILPQL ++ +T   +++T  Y+FFLG YR LY+ NW++RY TE  Y   I  +SG+VQT+ Y D            K L LP
Sbjct:   51 LFTVFISAYNTVMKIVFLVCAYVTVYLI--YGKFRKAYDSENDTFRLEFLLVPVIGLSFLENYEFTPLEILWTFSIYLESVAILPQLFMISKTGEAESITTHYLFFLGLYRVLYLANWIWRYHTEKFY-DQIAVVSGVVQTIFYFDFFYLYITKVLKGKKLSLP 211          

HSP 2 Score: 76.2554 bits (186), Expect = 1.162e-44
Identity = 33/56 (58.93%), Postives = 49/56 (87.50%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            N+FR++GD++HL ++++LLLK+   KSC+G+S K+Q L+ALVFTTRYLD+FT F+S
Sbjct:    2 NVFRISGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFIS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.162e-44
Identity = 66/165 (40.00%), Postives = 100/165 (60.61%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +SLYNT MK++++  SF+ VW +  +S  + +Y+ + DTFR  F          L+N +FT  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++RY  E  +   I  ++GLVQT+LY D            K L LPA
Sbjct:   51 LFTNYISLYNTCMKVVYIACSFTTVWMI--YSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFE-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212          

HSP 2 Score: 72.0182 bits (175), Expect = 1.162e-44
Identity = 30/57 (52.63%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR  GD++HL ++++LLLKI   +SC+G+S K+Q L+A+VFT RYLD+FT+++S+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.162e-44
Identity = 66/165 (40.00%), Postives = 100/165 (60.61%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +SLYNT MK++++  SF+ VW +  +S  + +Y+ + DTFR  F          L+N +FT  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++RY  E  +   I  ++GLVQT+LY D            K L LPA
Sbjct:   51 LFTNYISLYNTCMKVVYIACSFTTVWMI--YSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFE-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212          

HSP 2 Score: 72.0182 bits (175), Expect = 1.162e-44
Identity = 30/57 (52.63%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR  GD++HL ++++LLLKI   +SC+G+S K+Q L+A+VFT RYLD+FT+++S+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISL 58          
The following BLAST results are available for this feature:
BLAST of CX672341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERD23_XENLA2.371e-4541.46ER lumen protein retaining receptor 3 OS=Xenopus l... [more]
ERD22_CAEEL3.091e-4547.26Putative ER lumen protein retaining receptor C28H8... [more]
ERD22_XENLA3.091e-4538.32ER lumen protein retaining receptor 2 OS=Xenopus l... [more]
ERD22_DANRE4.028e-4537.58ER lumen protein retaining receptor 2 OS=Danio rer... [more]
ERD2_CAEBR6.842e-4548.63ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD2_CAEEL6.842e-4547.95ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD22_XENTR6.842e-4538.92ER lumen protein retaining receptor 2 OS=Xenopus t... [more]
ERD23_XENTR1.162e-4440.24ER lumen protein retaining receptor 3 OS=Xenopus t... [more]
ERD21_RAT1.162e-4440.00ER lumen protein retaining receptor 1 OS=Rattus no... [more]
ERD21_MOUSE1.162e-4440.00ER lumen protein retaining receptor 1 OS=Mus muscu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_16D05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16D05-H10-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672341 ID=CX672341; Name=CX672341; organism=Citrus sinensis; type=EST; length=805bp
TTTTTTTTCATATTAAACAGAAACGTTTTGTGTTGTATAAATGGTGTACA
AGGAATTAAGGAACACAAGAATTTAGCAGTCGAAGTATTAGAATGAACAT
TATCCGCAAATGCTGCTTGTGATAGATACTCTGGCAGTAGGTATACGAGG
GTGAGCATACTTAAGCCGGTAACTGAAGGTTCTTGTTGTTTTTCCAGCTG
TCGAAATAATAATAGAAGAAGTCGGCATATAGCAATGTTTGAACAAGCCC
TGAAATCCAAGGTATCCAATGCACATAGTGCGGCTCGGTGAAGTAGCGGT
AAACCCAGTTTAGGATGTATAATCCTCTATAAGCACCAAGAAAGAATACA
TATTGGCCTGTCAAATTGTCGATGTTTCTAGTCCTTTGCAAGAGTACAAG
CTGAGGAAGTATTGCAACGGCTTCTAAATACAGCGAAAATGTCCACATTA
CCTCCTTGAAGGTGAAATTTTCATTAATAAGAAGAGCCAAAAGTAAGCAA
GGCAAAACAAGGAAGAAACGGCGAAAGGTGTCCTGGTCTTTATTGTAAGA
CCTTCTCACAATGCTATGATGCCTCATGTACCAAACAATTGAAAACGAAC
TACCCAAGAATATAAGCTTCATTACTGTATTATACAGAGACAAAATCTGT
GAATATATCCAAGTATCGGGTGGTGAAAACCAGAGCGTAGAGCTCTTGAG
TCTTCAATGAAACGCCAGAGCAAGATTTAATGGTGTGGATCTTGAGGAGC
AAGACGAGAACGCTAGCTAAGTGGGTCATGTCACCCGCTAATCTGAAAAT
GTTCA
back to top