CX672341

Overview
NameCX672341
Unique NameCX672341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD21_HUMAN (ER lumen protein retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.162e-44
Identity = 66/165 (40.00%), Postives = 100/165 (60.61%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +SLYNT MK++++  SF+ VW +  +S  + +Y+ + DTFR  F          L+N +FT  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++RY  E  +   I  ++GLVQT+LY D            K L LPA
Sbjct:   51 LFTNYISLYNTCMKVVYIACSFTTVWLI--YSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFE-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212          

HSP 2 Score: 72.0182 bits (175), Expect = 1.162e-44
Identity = 30/57 (52.63%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR  GD++HL ++++LLLKI   +SC+G+S K+Q L+A+VFT RYLD+FT+++S+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD21_BOVIN (ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.162e-44
Identity = 66/165 (40.00%), Postives = 100/165 (60.61%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +SLYNT MK++++  SF+ VW +  +S  + +Y+ + DTFR  F          L+N +FT  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++RY  E  +   I  ++GLVQT+LY D            K L LPA
Sbjct:   51 LFTNYISLYNTCMKVVYIACSFTTVWMI--YSKFKATYDGNHDTFRVEFLVIPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFE-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212          

HSP 2 Score: 72.0182 bits (175), Expect = 1.162e-44
Identity = 30/57 (52.63%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR  GD++HL ++++LLLKI   +SC+G+S K+Q L+A+VFT RYLD+FT+++S+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD23_MOUSE (ER lumen protein retaining receptor 3 OS=Mus musculus GN=Kdelr3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.690e-44
Identity = 68/164 (41.46%), Postives = 99/164 (60.37%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            ++S  +S+YNTVMK++FL  ++  V YM +    R++++ + DTFR  F          L+N ++T  EV+WTFS+YLE+VAILPQL ++ +T   + +T  Y+FFLG YR LY+ NW+ RY TE  Y   I  +SG+VQT+ Y D            K L LP
Sbjct:   51 LFSNFISIYNTVMKVVFLLCAYVTV-YMIYWKF-RKTFDIENDTFRLEFLLVPVTGLSFLVNYSYTPMEVLWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRLLYLANWIRRYQTENFY-DQISVVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211          

HSP 2 Score: 75.485 bits (184), Expect = 5.690e-44
Identity = 32/57 (56.14%), Postives = 50/57 (87.72%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR+ GD++HL ++++LL+KI   KSC+G+S K+Q L+ALVFTTRYLD+F++F+S+
Sbjct:    2 NVFRILGDLSHLLAMILLLVKIWRSKSCAGISGKSQILFALVFTTRYLDLFSNFISI 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ER21A_XENLA (ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 7.417e-44
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = -1
Query:  164 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 658
            +++  +S YNT MK++++ SS++ VW +  +S  + +Y+ + DTFR  F          L+N +FT  E+ WTFS+YLE+VAILPQL ++ +T   + +T  Y+F LG YR LY+ NW++RY  E  +   I  ++GLVQT+LY D            K L LPA
Sbjct:   51 LFTNYISFYNTSMKVVYVASSYATVWMI--YSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIFWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRTLYLFNWIWRYQFE-GFFDLIAIVAGLVQTVLYCDFFYLYVTKVLKGKKLSLPA 212          

HSP 2 Score: 72.7886 bits (177), Expect = 7.417e-44
Identity = 31/56 (55.36%), Postives = 47/56 (83.93%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            NIFR  GD++HL+++ +LLLKI   +SC+G+S K+Q L+A+VFT RYLD+FT+++S
Sbjct:    2 NIFRFLGDISHLSAIFILLLKIWKSRSCAGISGKSQLLFAIVFTARYLDLFTNYIS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD23_HUMAN (ER lumen protein retaining receptor 3 OS=Homo sapiens GN=KDELR3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 9.663e-44
Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            +++  +S+YNTVMK++FL  ++  V+ +  +   R++++ + DTFR  F          L N +FT  E++WTFS+YLE+VAILPQL ++ +T   + +T  Y+FFLG YR LY+ NW+ RY TE  Y   I  +SG+VQT+ Y D            K L LP
Sbjct:   51 LFTNFISIYNTVMKVVFLLCAYVTVYMI--YGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFY-DQIAVVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211          

HSP 2 Score: 72.7886 bits (177), Expect = 9.663e-44
Identity = 32/57 (56.14%), Postives = 47/57 (82.46%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR+ GD++HL ++++LL KI   K C G+S K+Q L+ALVFTTRYLD+FT+F+S+
Sbjct:    2 NVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISI 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD23_DANRE (ER lumen protein retaining receptor 3 OS=Danio rerio GN=kdelr3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.134e-41
Identity = 60/146 (41.10%), Postives = 91/146 (62.33%), Query Frame = -1
Query:  221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658
            +++  +S YNTVMK+++L  ++S V  +      R SY+ + D+FR  F          L N  FT  E++WTFS+YLE+VAILPQL ++ +T   +++T  Y+ FLG YR LY+ NW++R+ TE  Y   I  +SG+VQT+ Y D
Sbjct:   51 LFTSYISAYNTVMKVVYLLLAYSTVGLIFFR--FRNSYDSESDSFRVEFLLVPVAGLSFLENYAFTPLEILWTFSIYLESVAILPQLFMITKTGEAESITAHYLLFLGLYRALYLANWLWRFHTEGFY-DQIAVVSGVVQTIFYCD 193          

HSP 2 Score: 76.6406 bits (187), Expect = 1.134e-41
Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            NIFRL+GD+ HL ++++L LKI   KSC+G+S K+Q L+ALVFTTRYLD+FT ++S
Sbjct:    2 NIFRLSGDVCHLIAIIILFLKIWRSKSCAGISGKSQVLFALVFTTRYLDLFTSYIS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.926e-41
Identity = 60/146 (41.10%), Postives = 92/146 (63.01%), Query Frame = -1
Query:  221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658
            I+    SLYNT++K+++L +S   ++ +      R +Y+K  DT   ++          +  E+++  E+ WTFS++LEAVAILPQ++LL+ T  ++NL  QY+F LG YR LYI+NW+YRY TE  Y   + WI G +QTLLY +
Sbjct:   53 IFYNFYSLYNTILKIVYLTTSAYTIYLISKR--FRATYDKIHDTLNVWYLIVPCIVLAFIFTEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWIYRYATEQSYWSPLTWICGSIQTLLYVE 196          

HSP 2 Score: 62.3882 bits (150), Expect = 1.926e-41
Identity = 28/57 (49.12%), Postives = 43/57 (75.44%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+FR++ D+ HL S+  LL KI + K+C G+SL++Q L+ +V+ TRYLDIF +F S+
Sbjct:    4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSL 60          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_DICDI (ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.228e-40
Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRR---SYNKDQDTFRRFFXXXXXXXXXXLINENFT------FKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            +++  +SLY T MK+ ++  S     Y   H I R+   +Y+KD DTF+  +          +  +  T      F E++WTFS+YLE++AILPQL+LLQRT  ++ LT  Y+  LG YR  Y+ NW+YR  T  ++   I  +SGL+QT+LYAD       S    K L LP
Sbjct:   51 LFTNYVSLYITFMKITYIAVS-----YYTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYSTFLEILWTFSIYLESIAILPQLILLQRTGEVEALTSNYIVLLGGYRAFYLFNWIYR-ITFYNWSGKIEMLSGLLQTILYADFFYYYAKSRMYGKKLVLP 217          

HSP 2 Score: 74.7146 bits (182), Expect = 1.228e-40
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = -3
Query:  633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803
            N+F   GDM HL S+L+LL KI   KSC+GVSLK+Q L+ +VFT RYLD+FT++VS+
Sbjct:    2 NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSL 58          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_PLAFA (ER lumen protein retaining receptor OS=Plasmodium falciparum GN=ERD2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.731e-39
Identity = 61/166 (36.75%), Postives = 97/166 (58.43%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFR-RFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRY-FTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            ++   +S YNTVMK+ F+ +    ++ +R    + ++YN+  D F+   +          L  + +    ++W+FS++LE+VAILPQLVLL++ R ++N+T  YV  +G YR  YILNW+YRY F +  Y++ + WI GL+QTLLY D       +    K L LP
Sbjct:   51 LFFVFVSFYNTVMKITFILTIAYTIYLIRLKLPISQTYNRKVDNFKSEKYLIPPCLVLSLLTCKTYNLYNILWSFSIWLESVAILPQLVLLEKQREVENITSHYVITMGLYRAFYILNWIYRYFFDDKPYINVVGWIGGLIQTLLYIDFFYYFALAKWYGKKLVLP 216          

HSP 2 Score: 65.855 bits (159), Expect = 1.731e-39
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            NIFRL GD+ HL S+ +L++K+   K+C G+S + QELY +VF  RY+D+F  FVS
Sbjct:    2 NIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVS 57          
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_PLAF7 (ER lumen protein retaining receptor OS=Plasmodium falciparum (isolate 3D7) GN=ERD2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.731e-39
Identity = 61/166 (36.75%), Postives = 97/166 (58.43%), Query Frame = -1
Query:  167 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFR-RFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRY-FTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 658
            ++   +S YNTVMK+ F+ +    ++ +R    + ++YN+  D F+   +          L  + +    ++W+FS++LE+VAILPQLVLL++ R ++N+T  YV  +G YR  YILNW+YRY F +  Y++ + WI GL+QTLLY D       +    K L LP
Sbjct:   51 LFFVFVSFYNTVMKITFILTIAYTIYLIRLKLPISQTYNRKVDNFKSEKYLIPPCLVLSLLTCKTYNLYNILWSFSIWLESVAILPQLVLLEKQREVENITSHYVITMGLYRAFYILNWIYRYFFDDKPYINVVGWIGGLIQTLLYIDFFYYFALAKWYGKKLVLP 216          

HSP 2 Score: 65.855 bits (159), Expect = 1.731e-39
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = -3
Query:  636 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVS 803
            NIFRL GD+ HL S+ +L++K+   K+C G+S + QELY +VF  RY+D+F  FVS
Sbjct:    2 NIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVS 57          
The following BLAST results are available for this feature:
BLAST of CX672341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERD21_HUMAN1.162e-4440.00ER lumen protein retaining receptor 1 OS=Homo sapi... [more]
ERD21_BOVIN1.162e-4440.00ER lumen protein retaining receptor 1 OS=Bos tauru... [more]
ERD23_MOUSE5.690e-4441.46ER lumen protein retaining receptor 3 OS=Mus muscu... [more]
ER21A_XENLA7.417e-4439.39ER lumen protein retaining receptor 1-A OS=Xenopus... [more]
ERD23_HUMAN9.663e-4439.63ER lumen protein retaining receptor 3 OS=Homo sapi... [more]
ERD23_DANRE1.134e-4141.10ER lumen protein retaining receptor 3 OS=Danio rer... [more]
ERD2_ENTHI1.926e-4141.10ER lumen protein retaining receptor OS=Entamoeba h... [more]
ERD2_DICDI1.228e-4038.15ER lumen protein retaining receptor OS=Dictyosteli... [more]
ERD2_PLAFA1.731e-3936.75ER lumen protein retaining receptor OS=Plasmodium ... [more]
ERD2_PLAF71.731e-3936.75ER lumen protein retaining receptor OS=Plasmodium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16D05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16D05-H10-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672341 ID=CX672341; Name=CX672341; organism=Citrus sinensis; type=EST; length=805bp
TTTTTTTTCATATTAAACAGAAACGTTTTGTGTTGTATAAATGGTGTACA
AGGAATTAAGGAACACAAGAATTTAGCAGTCGAAGTATTAGAATGAACAT
TATCCGCAAATGCTGCTTGTGATAGATACTCTGGCAGTAGGTATACGAGG
GTGAGCATACTTAAGCCGGTAACTGAAGGTTCTTGTTGTTTTTCCAGCTG
TCGAAATAATAATAGAAGAAGTCGGCATATAGCAATGTTTGAACAAGCCC
TGAAATCCAAGGTATCCAATGCACATAGTGCGGCTCGGTGAAGTAGCGGT
AAACCCAGTTTAGGATGTATAATCCTCTATAAGCACCAAGAAAGAATACA
TATTGGCCTGTCAAATTGTCGATGTTTCTAGTCCTTTGCAAGAGTACAAG
CTGAGGAAGTATTGCAACGGCTTCTAAATACAGCGAAAATGTCCACATTA
CCTCCTTGAAGGTGAAATTTTCATTAATAAGAAGAGCCAAAAGTAAGCAA
GGCAAAACAAGGAAGAAACGGCGAAAGGTGTCCTGGTCTTTATTGTAAGA
CCTTCTCACAATGCTATGATGCCTCATGTACCAAACAATTGAAAACGAAC
TACCCAAGAATATAAGCTTCATTACTGTATTATACAGAGACAAAATCTGT
GAATATATCCAAGTATCGGGTGGTGAAAACCAGAGCGTAGAGCTCTTGAG
TCTTCAATGAAACGCCAGAGCAAGATTTAATGGTGTGGATCTTGAGGAGC
AAGACGAGAACGCTAGCTAAGTGGGTCATGTCACCCGCTAATCTGAAAAT
GTTCA
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