CX672341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_KLULA (ER lumen protein retaining receptor OS=Kluyveromyces lactis GN=ERD2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.140e-38 Identity = 56/149 (37.58%), Postives = 89/149 (59.73%), Query Frame = -1 Query: 221 IYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKD---QDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYAD 658 ++++ SLYN +MK++F+ SS ++ MR +D +D F+ F + N F+F ++ W+FSL+LE+VAILPQL +L +T LT Y+F LG YR LYI NW++RY+TE + + +G++QTL+Y+D Sbjct: 52 LFTKWTSLYNFLMKIVFISSSVYVIVLMRQQKFKNPVAYQDMITRDQFKIKFLIVPCILLGLIFNYRFSFIQICWSFSLWLESVAILPQLFMLTKTGKAKQLTSHYIFALGLYRALYIPNWIWRYYTEERF-DKLSVFTGVIQTLVYSD 199 HSP 2 Score: 70.8626 bits (172), Expect = 4.140e-38 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = -3 Query: 633 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSV 803 N+FR+AGD +HLAS+++L+ I T S G+SLKTQ LY LVF TRYL++FT + S+ Sbjct: 3 NVFRIAGDFSHLASIIILIQSITTSNSVDGISLKTQLLYTLVFITRYLNLFTKWTSL 59
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_YEAST (ER lumen protein retaining receptor OS=Saccharomyces cerevisiae GN=ERD2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.550e-34 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = -1 Query: 167 LSLYNTVMKLIFLGSSFSIVWYMRHHSIVRR-SYNKD--QDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLP 643 +SLYN +MK+ F+ S+ IV ++ +YN+ DTF+ + FTF E+ W+FS++LE+VAILPQL +L + +LT Y+F +G YR LYI NW++RY TE + I + +GL+QTLLY+D + K +LP Sbjct: 57 VSLYNALMKIFFIVSTAYIVVLLQGSKRTNTIAYNEMLMHDTFKIQHLLIGSALMSVFFHHKFTFLELAWSFSVWLESVAILPQLYMLSKGGKTRSLTVHYIFAMGLYRALYIPNWIWRYSTEDKKLDKIAFFAGLLQTLLYSDFFYIYYTKVIRGKGFKLP 218 HSP 2 Score: 63.929 bits (154), Expect = 2.550e-34 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = -3 Query: 648 NIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFT 803 N FR+ GD++HL S+L+L+ I T + G+S KTQ LYALVF TRYLD+ T Sbjct: 2 NPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLT 53
BLAST of CX672341 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 57/166 (34.34%), Postives = 92/166 (55.42%), Query Frame = -1 Query: 164 WIYSQILSLYNTVMKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXLINENFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADXXXXXFDSWKNNKNLQLPA 661 W Y SLY +M+++F+ S I + M +R +Y+K DTFR + + ++T ++WTFS++LE+VAILPQL +LQR+ ++LT Y+F + YRGLYI +W+YR + + ++G++QT+LY D + K +LPA Sbjct: 53 WRYK---SLYYFLMRIVFIASESYICYLML--MTLRPTYDKRLDTFRTEYILGGCAVLALIYPTSYTISNILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIPHWIYRIAVHKKVI-GVAILAGIIQTVLYGDFAVVYRRTVLQGKKFRLPA 212 The following BLAST results are available for this feature:
BLAST of CX672341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672341 ID=CX672341; Name=CX672341; organism=Citrus sinensis; type=EST; length=805bpback to top |