EG358379

Overview
NameEG358379
Unique NameEG358379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length234
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5185 contig Csv1_Contig5185:99..332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: CSK2C_DROME (Casein kinase II subunit beta' OS=Drosophila melanogaster GN=CkIIbeta2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.844e-19
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPR-SKYQDIDGAYFGTTFPHLFLMTYGHLKPQKA 233
            +FG CPR +C  QP LP+G SD P    V+IYCP+C D+Y P+ S++ ++DGA+FGT FPH+F M     +P++A
Sbjct:  103 EFGTCPRAFCHSQPVLPIGLSDNPGEDMVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRA 177          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: CSK2B_CANAL (Casein kinase II subunit beta OS=Candida albicans GN=CKB1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.203e-16
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYP-RSKYQDIDGAYFGTTFPHLFLMTYGHLKPQ 227
            DFG CPR +C G   +PVG +D+P   TV+++CP C DIY P  S+Y +IDGA+FGTTFP L +  +  ++ Q
Sbjct:  133 DFGSCPRYFCDGMHLIPVGSTDVPGQETVRLFCPCCNDIYIPSSSRYLNIDGAFFGTTFPGLLVKMFPEIENQ 205          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: CSK2C_SCHPO (Probable casein kinase II subunit beta-2 OS=Schizosaccharomyces pombe GN=SPBC2G5.02c PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.501e-16
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3
Query:   15 FGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYP-RSKYQDIDGAYFGTTFPHLFLMTYGHLKPQKA 233
            FG CPRV CC    LP G SDI     V ++CP C D+Y P  S+Y++IDG++FG TFPHLF  +Y  L P+++
Sbjct:  136 FGCCPRVNCCYTHVLPAGLSDIVGKMPVMLFCPNCLDLYAPSSSRYKNIDGSFFGATFPHLFFESYPELNPKRS 209          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: SSL_DROME (Suppressor-of-stellate-like protein OS=Drosophila melanogaster GN=Ssl PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.056e-15
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLFLMTYGHLKP 224
            DFG CPRV+C  Q  LPVG  D+   + VKIYCP C ++Y P      +DGA FGT+FPH+F M    L P
Sbjct:   98 DFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIPLPHNGMLDGAMFGTSFPHMFFMQLPSLIP 168          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: CSK2B_NEUCR (Casein kinase II subunit beta-1 OS=Neurospora crassa GN=ckb-1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.471e-14
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 3
Query:   15 FGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYY-PRSKYQDIDGAYFGTTFPHLFLMTY 209
            FG CPR  C     LPVG SD P   TVK++CP C D+Y  P S++Q +DGA+FG TF  LFLMT+
Sbjct:  137 FGICPRTNCNQTRTLPVGLSDTPGEDTVKLFCPSCLDVYVPPNSRFQTVDGAFFGRTFGALFLMTF 202          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: CSK2B_YEAST (Casein kinase II subunit beta OS=Saccharomyces cerevisiae GN=CKB1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.245e-13
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPR-SKYQDIDGAYFGTTFPHLFLMTYGHLK 221
            +FG CPR YC G   LP G SD     TV++YCP C+D+Y P+ S++  ++GA++GT+FP +FL  +  L+
Sbjct:  152 EFGTCPRYYCNGMQLLPCGLSDTVGKHTVRLYCPSCQDLYLPQSSRFLCLEGAFWGTSFPGVFLKHFKELE 222          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: STEL6_DROME (Stellate protein CG33246 OS=Drosophila melanogaster GN=Ste:CG33246 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.348e-12
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLF 197
            DFG CP + C  Q  LPVG S +   STVKI+CPRC+  +YP+S  Q +DGA FG +FP +F
Sbjct:   96 DFGSCPNISCDRQNTLPVGLSAVWGKSTVKIHCPRCKSNFYPKSDTQ-LDGAMFGPSFPDIF 156          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: STEL5_DROME (Stellate protein CG33243 OS=Drosophila melanogaster GN=Ste:CG33243 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.833e-12
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLF 197
            DFG CP + C  Q  LPVG S +   STVKI+CPRC+  ++P+S  Q +DGA FG +FP +F
Sbjct:   96 DFGSCPNISCYRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQ-LDGAMFGPSFPDIF 156          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: STEL3_DROME (Stellate protein CG33238 OS=Drosophila melanogaster GN=Ste:CG33238 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.833e-12
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLF 197
            DFG CP + C  Q  LPVG S +   STVKI+CPRC+  ++P+S  Q +DGA FG +FP +F
Sbjct:   96 DFGSCPNISCYRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQ-LDGAMFGPSFPDIF 156          
BLAST of EG358379 vs. ExPASy Swiss-Prot
Match: STEL8_DROME (Stellate orphon protein at 12D OS=Drosophila melanogaster GN=Ste12DOR PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.924e-12
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   12 DFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLF 197
            DFG CP + C  Q  LPVG S +   STVKI+CPRC+  ++P+S  Q +DGA FG +FP +F
Sbjct:   96 DFGSCPNISCDRQNTLPVGVSAVWGKSTVKIHCPRCKSNFHPKSDTQ-LDGAMFGPSFPDIF 156          
The following BLAST results are available for this feature:
BLAST of EG358379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CSK2C_DROME9.844e-1949.33Casein kinase II subunit beta' OS=Drosophila melan... [more]
CSK2B_CANAL1.203e-1649.32Casein kinase II subunit beta OS=Candida albicans ... [more]
CSK2C_SCHPO3.501e-1650.00Probable casein kinase II subunit beta-2 OS=Schizo... [more]
SSL_DROME5.056e-1550.70Suppressor-of-stellate-like protein OS=Drosophila ... [more]
CSK2B_NEUCR1.471e-1454.55Casein kinase II subunit beta-1 OS=Neurospora cras... [more]
CSK2B_YEAST1.245e-1345.07Casein kinase II subunit beta OS=Saccharomyces cer... [more]
STEL6_DROME2.348e-1253.23Stellate protein CG33246 OS=Drosophila melanogaste... [more]
STEL5_DROME6.833e-1251.61Stellate protein CG33243 OS=Drosophila melanogaste... [more]
STEL3_DROME6.833e-1251.61Stellate protein CG33238 OS=Drosophila melanogaste... [more]
STEL8_DROME8.924e-1251.61Stellate orphon protein at 12D OS=Drosophila melan... [more]

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Properties
Property NameValue
Genbank description12c5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0012c5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358379 ID=EG358379; Name=EG358379; organism=Citrus sinensis; type=EST; length=234bp
ACAAGAACTATGACTTTGGGAGATGTCCCAGGGTCTACTGCTGTGGACAA
CCCTGCCTTCCGGTTGGTCAATCGGACATTCCTCGTTCAAGCACTGTGAA
AATATACTGCCCCAGATGTGAAGATATTTACTACCCTAGGTCCAAGTATC
AAGACATTGATGGAGCCTATTTTGGAACGACGTTTCCTCACCTCTTCCTG
ATGACTTACGGGCACCTCAAGCCACAAAAGGCAG
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