EY664727

Overview
NameEY664727
Unique NameEY664727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7629 contig Csv1_Contig7629:26..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY664727 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.245e-47
Identity = 108/278 (38.85%), Postives = 159/278 (57.19%), Query Frame = 2 
Query:   53 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPXDKXVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTXDXILYINPLXIFTHSMXLCXLGERKIGKTLQRVYVREEQVLKNIQEAAPSVNGIYSIQHSAFGKGDPTTF 880
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RT +  ++  P         L  L E+KIG+TL R  V  +++L +  E     + + S  H  F  G    F
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNF 287
The following BLAST results are available for this feature:
BLAST of EY664727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN6.245e-4738.85Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664727 ID=EY664727; Name=EY664727; organism=Citrus sinensis; type=EST; length=881bp
AAAAAATTGAAAGAATCCCCGAAATTGAACTGAATAATTCTCGGTAATGG
CGTCGAAAAGCAAGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAA
TTCATCGTCGAAGCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGT
GAGAGAATCCACACTCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACT
TCAAAAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAG
AGCTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGG
TCACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAG
CTGGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGAT
CGAGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAA
AATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGT
CGAATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCC
ACTGCCCCACCTANGGATAAAGNTGTCATCTTAGGCGATGGAAATCCAAA
AGCTGTTTATAACAAGGAAGATGATATTGGAACCTATACTATCAAAGCGG
TTGATGATCCCAGAACCTTNGACANNATCCTTTACATTAACCCCCTGGNN
ATATTTACTCATTCAATGANTCTGTGTNCCTTGGGGGAGAGAAAAATTGG
CAAAACCCTCCAAAGGGTGTACGTTCGGGAGGAGCAAGTCCTAAAGAATA
TTCAAGAAGCTGCACCTTCAGTCAATGGGATATATTCAATTCAGCACTCT
GCTTTCGGGAAGGGAGATCCAACCACCTTCA
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