EG358365

Overview
NameEG358365
Unique NameEG358365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT1_PONAB (Histidine triad nucleotide-binding protein 1 OS=Pongo abelii GN=HINT1 PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 4.939e-32
Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S AE+ +  +LG L+   K  A   GL  G+R+V+N+G +GGQSV+H+H+H+LGGRQM+WPPG
Sbjct:   17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT1_HUMAN (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 8.425e-32
Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S AE+    +LG L+   K  A   GL  G+R+V+N+G +GGQSV+H+H+H+LGGRQM+WPPG
Sbjct:   17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT_CAEEL (Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis elegans GN=hint-1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.100e-31
Identity = 59/112 (52.68%), Postives = 85/112 (75.89%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            T+F KII KEIP+K+++EDD+ LAF D+ PQAP H L+IPK +  +  L  A +    ++G+L+ TA  VAKQ G+ +G+R+V+N+G +G QSVFH+H+H+LGGRQ+ WPPG
Sbjct:   21 TLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDM--LENAVDSDAALIGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.718e-29
Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            TIF KII +EIP+ +VYEDD  LAF+D+ PQAP H+L+IPK    L  LS A      +LG LL  AK VA   G+ D FR+VIN+G   GQ+VFH+H+H+LGGR  +WPPG
Sbjct:    5 TIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPKKP--LPQLSAATPEDHALLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.784e-27
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 404
            TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.784e-27
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 404
            TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.784e-27
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 404
            TIF KII +EIPS +VY+DD V AFRDI PQAPTHILIIP +   +  ++     H + LGR++  A  +A+QEG+ EDG+R+++N   +GGQ V+HIH+HLLGGR +
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.248e-27
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 3
Query:   87 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQ------EGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            IF KI+  E+P+K VYEDDKVLAF DI P AP HILIIPK    + G+   E     ++G + Y A+ +A+       E L  G+R+V N G + GQSVFH+H+HL+GGR+M+WPPG
Sbjct:    7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKH--IMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.444e-24
Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIP-KVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 404
            TIF KII KEIP+ +VY+D+ V AFRDI PQA THILIIP KV   +  +++ +E     LGRL   A  +AK+EG+ EDG+R+++N   +GGQ VFH+H+HL+GG  +
Sbjct:    5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDE---VALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110          
BLAST of EG358365 vs. ExPASy Swiss-Prot
Match: PKIA_DICDI (Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 7.148e-23
Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 3
Query:   84 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVK-DGLTGLSKAE-ERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 419
            TIF KII+  IPSK  Y+D+  +A  DI PQAP H+L+IPK+   GL+ ++  + E++ E +G ++     +A  +G  D +R+VIN+G  G QSV  +H+H+LGGRQMNWPPG
Sbjct:   15 TIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPVHLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKGA-DSYRLVINEGVLGQQSVRWLHIHILGGRQMNWPPG 127          
The following BLAST results are available for this feature:
BLAST of EG358365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
HINT1_PONAB4.939e-3255.36Histidine triad nucleotide-binding protein 1 OS=Po... [more]
HINT1_HUMAN8.425e-3255.36Histidine triad nucleotide-binding protein 1 OS=Ho... [more]
HINT_CAEEL1.100e-3152.68Histidine triad nucleotide-binding protein 1 OS=Ca... [more]
YHIT_SYNY38.718e-2955.36Uncharacterized HIT-like protein slr1234 OS=Synech... [more]
HINT_SHIFL4.784e-2753.70HIT-like protein hinT OS=Shigella flexneri GN=hinT... [more]
HINT_ECOLI4.784e-2753.70HIT-like protein hinT OS=Escherichia coli (strain ... [more]
HINT_ECO574.784e-2753.70HIT-like protein hinT OS=Escherichia coli O157:H7 ... [more]
YHIT_AQUAE6.248e-2750.43Uncharacterized HIT-like protein aq_141 OS=Aquifex... [more]
Y961_HAEIN8.444e-2452.29HIT-like protein HI0961 OS=Haemophilus influenzae ... [more]
PKIA_DICDI7.148e-2347.37Protein pkiA OS=Dictyostelium discoideum GN=pkiA P... [more]

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Properties
Property NameValue
Genbank description5c5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0005c5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358365 ID=EG358365; Name=EG358365; organism=Citrus sinensis; type=EST; length=476bp
ACGCGGGGACGTATCATTTGTCTGCCGTCGTCATGGCTTCAGAGAAAGAG
GCTGCTGCTGCAGCCGTTCCTTCTGATTCGCCCACCATATTTGACAAAAT
AATTAACAAAGAAATCCCATCTAAAGTTGTTTATGAGGATGATAAGGTCT
TAGCCTTTAGGGACATAGAGCCCCAAGCTCCTACACACATTCTAATTATT
CCCAAAGTGAAGGATGGCTTGACTGGACTTTCAAAGGCTGAGGAAAGGCA
TTGCGAAATTCTTGGCCGCCTTCTTTACACTGCTAAGCTTGTTGCTAAAC
AGGAAGGACTAGAAGACGGCTTTAGGATTGTGATTAATGATGGGCCAAAT
GGAGGTCAATCAGTTTTTCACATCCACGTCCACCTCCTAGGAGGACGACA
AATGAACTGGCCCCCGGGCTAAGATGAAGTATTTTGGGTGCCAGATTCTC
TTATGAAAAAATGATTACGCCCTTTG
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