EY664716 | Citrus Genome Database

Overview


Name	EY664716
Unique Name	EY664716
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	908

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 6.688e-93
Identity = 142/225 (63.11%), Postives = 173/225 (76.89%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+++PG+K HKKE  EAVTII+TPP+         +TPRGLRSL TVWA+HL++EV+RRFYKNW                +D+    I  +LE++KKYCTV+RVLAHTQIRK   LKQKKAHLMEIQ+NGGSVA KV+F +G FEK + ID++F+KDE+ID+I VTK
Sbjct:    1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNW-YKSKKKAFTKYVKKHSDNNGAAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTK 223

HSP 2 Score: 50.0618 bits (118), Expect = 6.688e-93
Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTH+GLRK ACIG
Sbjct:  223 KGHGFTGVTARWGTKKLPRKTHKGLRKVACIG 254

HSP 3 Score: 45.0542 bits (105), Expect = 6.688e-93
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  + V +TVARAGQ GYHHRT +N K
Sbjct:  249 KVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHK 282

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 1.231e-91
Identity = 146/225 (64.89%), Postives = 173/225 (76.89%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP  LTAFLGYKAGMTHIVRD+++PGSK+HK+E  EAVTIIETPP+         +TPRGLRSL TVWA+HL+EEV+RRFYKNW               +  +  + I  +LE++KKYC+V+RVLAHTQIRK   L QKKAHLMEIQVNGGSVA KV++A   FEK + I + F+++EMID+IGVT+
Sbjct:    1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTR 222

HSP 2 Score: 49.6766 bits (117), Expect = 1.231e-91
Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            +G+   G   RWG  RLPRKTHRGLRK ACIG
Sbjct:  222 RGKGNEGTTARWGTKRLPRKTHRGLRKVACIG 253

HSP 3 Score: 41.9726 bits (97), Expect = 1.231e-91
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V +TVARAG  GY HRT++N K
Sbjct:  248 KVACIGAWHPANVQWTVARAGNAGYMHRTQLNSK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 1.604e-91
Identity = 145/225 (64.44%), Postives = 173/225 (76.89%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP  LTAFLGYKAGMTHIVRD+++PGSK+HK+E  EAVT+IETPP+         +TPRGLRSL TVWA+HL+EEV+RRFYKNW               +  +  + I  +LE++KKYC+V+RVLAHTQIRK   L QKKAHLMEIQVNGGSVA KV++A   FEK + I + F+++EMID+IGVT+
Sbjct:    1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTR 222

HSP 2 Score: 49.6766 bits (117), Expect = 1.604e-91
Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            +G+   G   RWG  RLPRKTHRGLRK ACIG
Sbjct:  222 RGKGNEGTTARWGTKRLPRKTHRGLRKVACIG 253

HSP 3 Score: 41.9726 bits (97), Expect = 1.604e-91
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V +TVARAG  GY HRT++N K
Sbjct:  248 KVACIGAWHPANVQWTVARAGNAGYMHRTQLNSK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 7.065e-89
Identity = 133/225 (59.11%), Postives = 167/225 (74.22%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV+KPGSK++KKE  EAV+IIETPP+          TP+G R+L T+WA+HL+EE RRRFY NW               + +DGKK I+A   K+KKYC+ IRV+AHTQ++ ++  +QKKAHL+EIQ+NGG++ QKVD+A    EKQI +D VF +DEMID IGVTK
Sbjct:    1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTK 224

HSP 2 Score: 47.7506 bits (112), Expect = 7.065e-89
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  +RV+FTVARAGQ G+HHRT +N K
Sbjct:  250 KVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283

HSP 3 Score: 47.3654 bits (111), Expect = 7.065e-89
Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 KGHGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 7.065e-89
Identity = 132/226 (58.41%), Postives = 170/226 (75.22%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC-XXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKFE PRHG+LGF PRKRA+RH+GKVK+FPKDD ++   LTAF+GYKAGMTH+VRD+EKPGSK+HKKE  EAVTIIE PP+         +T +GL++  TVWAQHL++  RRR YKNW                ET++GKK I+A L+ +KK C+V+RV+AHTQ+ K+K L QKKAH++EIQVNGGS+ +KV+FA   FEK + +  VF ++E+ID+IGVTK
Sbjct:    1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTK 225

HSP 2 Score: 53.1434 bits (126), Expect = 7.065e-89
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV+ RWGV +LPRKTH+GLRK ACIG
Sbjct:  225 KGKGFNGVIKRWGVRKLPRKTHKGLRKVACIG 256

HSP 3 Score: 46.595 bits (109), Expect = 7.065e-89
Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  +RVS TV RAGQ GYHHR E NKK
Sbjct:  251 KVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKK 284

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.036e-88
Identity = 132/225 (58.67%), Postives = 167/225 (74.22%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV+KPGSK++KKE  EAVTI+ETPP+          TP+G R+L T+WA+HL+EE RRRFY NW               + +DGKK I+A   K+KKYC+ IRV+AHTQ++ ++  +QKKAHL+EIQVNGG++ QKVD+A    EKQ+ +D VF +DEMID IGVT+
Sbjct:    1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 224

HSP 2 Score: 47.7506 bits (112), Expect = 2.036e-88
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  +RV+FTVARAGQ G+HHRT +N K
Sbjct:  250 KVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283

HSP 3 Score: 46.2098 bits (108), Expect = 2.036e-88
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            +G    GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 5.873e-88
Identity = 132/225 (58.67%), Postives = 169/225 (75.11%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHG LGFLPRKRA+  RG+VKAFPKDD SKP  LT+FLGYKAGMT IVRD+++PGSK HK+E  EAV++++TPP+         +TPRGLRSL TVWA+HL++E++RRFYKNW                  DG   I+ +L ++KKY +V+RVLAHTQ+RK   L QKKAHL EIQ+NGGSV++KVD+A   FEK + +D+VF+++EMID+I VTK
Sbjct:    1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTQVPPPSTAQDGAA-IERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTK 223

HSP 2 Score: 50.447 bits (119), Expect = 5.873e-88
Identity = 22/32 (68.75%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTHRGLRK ACIG
Sbjct:  223 KGHGFEGVTHRWGTKKLPRKTHRGLRKVACIG 254

HSP 3 Score: 48.9062 bits (115), Expect = 5.873e-88
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V +TVARAGQNGYHHRT +N K
Sbjct:  249 KVACIGAWHPAHVMWTVARAGQNGYHHRTSINHK 282

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.299e-87
Identity = 133/225 (59.11%), Postives = 167/225 (74.22%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHGSLGFLPRKR++  RG+VK+FPKD  SKP  LTAFLGYKAGMT +VRD+++PGSK+HK+E  EA T+++TPPL         +TPRGLRSL TVWA+HL+EEVRRRFYKNW                 D  +  ++ +L ++KKY +V+RVLAHTQI+K   L QKKAHL EIQVNGGSV+ KVD+A   FEK + +D+VF+KDEM+D+  VTK
Sbjct:    1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDLDRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTK 222

HSP 2 Score: 50.447 bits (119), Expect = 1.299e-87
Identity = 22/32 (68.75%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTHRGLRK ACIG
Sbjct:  222 KGHGFEGVTHRWGTKKLPRKTHRGLRKVACIG 253

HSP 3 Score: 47.7506 bits (112), Expect = 1.299e-87
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V +TVARAGQNG+HHRT +N K
Sbjct:  248 KVACIGAWHPANVQWTVARAGQNGFHHRTSINHK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3)

HSP 1 Score: 265.774 bits (678), Expect = 2.204e-87
Identity = 131/225 (58.22%), Postives = 160/225 (71.11%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ ++PGSK++KKE  EAVT++ETPP+         +TP GLR+L  VWAQHL+EE RRRFYKNW                 D GKK I+    KM +YC VIRV+AH+QIR +K  +QKKAH+MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTK
Sbjct:    1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTK 224

HSP 2 Score: 52.373 bits (124), Expect = 2.204e-87
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  +RVS TVARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 283

HSP 3 Score: 48.1358 bits (113), Expect = 2.204e-87
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3)

HSP 1 Score: 260.766 bits (665), Expect = 6.875e-86
Identity = 127/225 (56.44%), Postives = 159/225 (70.67%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V +PG K+ K+E  EAVTI+ETPPL          TPRGLRS  T++A+HL++E RRRFYK+W                  DGKK +Q     MKKYC VIRV+ HTQ+ K+   +QKKAH+MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTK
Sbjct:    1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTK 224

HSP 2 Score: 50.8322 bits (120), Expect = 6.875e-86
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSLESHP 901
            +V  + AW  ARV  ++ARAGQ GYHHRTE+NKK   +   P
Sbjct:  250 KVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGP 291

HSP 3 Score: 49.6766 bits (117), Expect = 6.875e-86
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KGR + GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 KGRGVKGVTSRWHTKKLPRKTHKGLRKVACIG 255

The following BLAST results are available for this feature:

BLAST of EY664716 vs. ExPASy Swiss-Prot

BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80


Match Name	E-value	Identity	Description
RL3_NEUCR	6.688e-93	63.11	60S ribosomal protein L3 OS=Neurospora crassa GN=r...	[more]
RL3B_SCHPO	1.231e-91	64.89	60S ribosomal protein L3-B OS=Schizosaccharomyces ...	[more]
RL3A_SCHPO	1.604e-91	64.44	60S ribosomal protein L3-A OS=Schizosaccharomyces ...	[more]
RL3_CAEBR	7.065e-89	59.11	60S ribosomal protein L3 OS=Caenorhabditis briggsa...	[more]
RL3_DICDI	7.065e-89	58.41	60S ribosomal protein L3 OS=Dictyostelium discoide...	[more]
RL3_CAEEL	2.036e-88	58.67	60S ribosomal protein L3 OS=Caenorhabditis elegans...	[more]
RL3_ASHGO	5.873e-88	58.67	60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL...	[more]
RL3_DEBHA	1.299e-87	59.11	60S ribosomal protein L3 OS=Debaryomyces hansenii ...	[more]
RL3_DROME	2.204e-87	58.22	60S ribosomal protein L3 OS=Drosophila melanogaste...	[more]
RL3L_HUMAN	6.875e-86	56.44	60S ribosomal protein L3-like OS=Homo sapiens GN=R...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT