EY664716 | Citrus Genome Database

Overview


Name	EY664716
Unique Name	EY664716
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	908

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 1.167e-85
Identity = 126/225 (56.00%), Postives = 160/225 (71.11%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V +PG K+ K+E  EAVTI+ETPPL          TPRGLRS  T++A+HL++E RRRFYK+W                  DGKK +Q     MKKYC VIRV+ HTQ+ K+   +QKKAH+ME+Q+NGG+VA+KV +A    EKQ+P+ +VF ++E+ID+I VTK
Sbjct:    1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTK 224

HSP 2 Score: 50.447 bits (119), Expect = 1.167e-85
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARV  ++ARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPARVGCSIARAGQKGYHHRTELNKK 283

HSP 3 Score: 49.6766 bits (117), Expect = 1.167e-85
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KGR + GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 KGRGIKGVTSRWHTKKLPRKTHKGLRKVACIG 255

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 3.366e-85
Identity = 130/225 (57.78%), Postives = 167/225 (74.22%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+++PGSK HK+E  EAVT+++TPP+         +TPRGLRSL TVWA+HL++EV+RRFYKNW                 +    +I+ +L ++KKY TV+RVL HTQ+RK   L QKKAHL EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTK
Sbjct:    1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAHLAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTK 222

HSP 2 Score: 50.447 bits (119), Expect = 3.366e-85
Identity = 22/32 (68.75%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTHRGLRK ACIG
Sbjct:  222 KGHGFEGVTHRWGTKKLPRKTHRGLRKVACIG 253

HSP 3 Score: 45.0542 bits (105), Expect = 3.366e-85
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V ++VARAGQ GYHHRT +N K
Sbjct:  248 KVACIGAWHPAHVMWSVARAGQRGYHHRTSINHK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 2.794e-84
Identity = 127/225 (56.44%), Postives = 166/225 (73.78%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD +KP  LT+FLGYKAGM+ IVRD+++PGSK HK+E  EAVT+++TPP+         +TPRGLRSL TVWA+HL++EV+RRFYKNW                 +  + D   +L ++KKY +V+RVL HTQ+RK   L QKKAHL EIQ+NGGSV+ KVD+A   FEK + +D+VF+++EMID++ VTK
Sbjct:    1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAENGAQVD--RELARIKKYASVVRVLVHTQVRKTP-LSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTK 222

HSP 2 Score: 50.447 bits (119), Expect = 2.794e-84
Identity = 22/32 (68.75%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTHRGLRK ACIG
Sbjct:  222 KGHGFEGVTHRWGTKKLPRKTHRGLRKVACIG 253

HSP 3 Score: 45.0542 bits (105), Expect = 2.794e-84
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V ++VARAGQ GYHHRT +N K
Sbjct:  248 KVACIGAWHPAHVMWSVARAGQRGYHHRTSINHK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4)

HSP 1 Score: 262.307 bits (669), Expect = 8.052e-84
Identity = 131/225 (58.22%), Postives = 165/225 (73.33%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+++PGSK HK+E  EAVT+++TPP+         +TPRGLRSL TVWA+HL++EV+RRFYKNW                 D     I+ +L ++KKY +V+RVL HTQIRK   L QKKAHL EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTK
Sbjct:    1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTK 222

HSP 2 Score: 50.447 bits (119), Expect = 8.052e-84
Identity = 22/32 (68.75%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV  RWG  +LPRKTHRGLRK ACIG
Sbjct:  222 KGHGFEGVTHRWGTKKLPRKTHRGLRKVACIG 253

HSP 3 Score: 41.5874 bits (96), Expect = 8.052e-84
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  A V ++VARAGQ GYH RT +N K
Sbjct:  248 KVACIGAWHPAHVMWSVARAGQRGYHSRTSINHK 281

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.461e-51
Identity = 96/226 (42.48%), Postives = 128/226 (56.64%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD-VEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+ YKAGMTH+VR   +   +K   +E  +AVT++E PP+         KT  GLR L  V A ++++ V RR + N                         ++++E +K+    +RVL  TQ   +KGL  KKAH+ EIQVNGGS+++KV++A G  EK+I I  VF  +E ID IGVTK
Sbjct:    1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTKTQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMFGNRYASKESAGQFCKGSV--------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLKKAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTK 218

HSP 2 Score: 43.1282 bits (100), Expect = 6.461e-51
Identity = 17/34 (50.00%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  +RV +++ARAGQ G+H RTE NK+
Sbjct:  244 KVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKR 277

HSP 3 Score: 40.4318 bits (93), Expect = 6.461e-51
Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   G V R+GV + PRK+ +G+RK ACIG
Sbjct:  218 KGKGFQGTVKRFGVRKQPRKSRKGIRKVACIG 249

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_AERPE (50S ribosomal protein L3P OS=Aeropyrum pernix GN=rpl3p PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.182e-32
Identity = 86/228 (37.72%), Postives = 121/228 (53.07%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTP-RGLRSLCTVWAQHLNE-EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M  RK   PR GSLGF PRKRASR   +VK +P+ D  KP  L AFLGY+AGMTH+    ++PG     KE    VTI+ETPP+           P RG  SL   WAQ   E E++RR                    +TD   K ++ +L+K +     +R++A +Q +   GL +KK  L+EI+V G S V +  D+A       I ++ VF++ +++D+I VTK
Sbjct:    1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI-------------STLGSFDTDKMLKSLEERLDKAED----VRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTK 210

HSP 2 Score: 30.4166 bits (67), Expect = 4.182e-32
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ RWGV  LPR  K  +G R+
Sbjct:  210 KGKGFQGVIKRWGVKELPRWHKHRKGSRR 238

HSP 3 Score: 28.4906 bits (62), Expect = 4.182e-32
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  830 RAGQNGYHHRTEMNKKFTSLE 892
            +AGQ G+H RTE NK+   ++
Sbjct:  254 QAGQTGFHRRTEYNKRILMID 274

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_THEGJ (50S ribosomal protein L3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.851e-29
Identity = 76/229 (33.19%), Postives = 108/229 (47.16%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFY---KNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV-----IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA     ++K +PKD      R+  F GYKAGMTHI+   + PG     KE    VTI+E PPL         +   GL +   VW   LN+ V+RR     KN+                   G++D +A+L +++          +R+L HTQ   +K   +KK  +ME  + G  V  K ++A     K+I    V  + E++D+I VTK
Sbjct:    3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPGLT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRIKTLPKNY-------------------GEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTK 206

HSP 2 Score: 43.5134 bits (101), Expect = 4.851e-29
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            L  W  ARV +TV +AGQ G+HHRTE NK+  ++
Sbjct:  238 LGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAI 271

HSP 3 Score: 23.0978 bits (48), Expect = 4.851e-29
Identity = 16/41 (39.02%), Postives = 19/41 (46.34%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIGCL 798
            L ++   KG+   G V RWGV     K  R   KG  IG L
Sbjct:  199 LDVIAVTKGKGTQGPVKRWGVKVQFHKAQRA-GKGRHIGNL 238

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_ARCFU (50S ribosomal protein L3P OS=Archaeoglobus fulgidus GN=rpl3p PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.308e-29
Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K+  PR GSL F PRKRA     +++A+P+ D     R+  F GYKAGMTH+V   ++  S  + +E    VT+IETPP+         KT  G++    VW+ +L++ + RR                         + D++     ++   + +RV+ +TQ   + G+ +K   +ME ++ GG+V + +D+A     K+I +  VF +  +ID+I VTK
Sbjct:    2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL-------------------NLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVMEHRI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTK 199

HSP 2 Score: 36.5798 bits (83), Expect = 6.308e-29
Identity = 17/40 (42.50%), Postives = 23/40 (57.50%), Query Frame = 2

Query:  770 YARVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            + RV  L  W    V +TV +AGQ G+H RTE NK+   +
Sbjct:  225 HRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKI 264

HSP 3 Score: 23.8682 bits (50), Expect = 6.308e-29
Identity = 11/23 (47.83%), Postives = 12/23 (52.17%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHR 765
            KG+   G V RWGV  L  K  R
Sbjct:  199 KGKGFQGPVKRWGVITLDAKHAR 221

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METVS (50S ribosomal protein L3P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.063e-28
Identity = 74/223 (33.18%), Postives = 113/223 (50.67%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQA--QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S  + +E    VT++ETP +         KT +GL++L  VWA+  ++E+ R+                     T   K++I+    L+ + +    +RV+ HT   K  G+ +KK  ++EI+V G SVA+K+ +A     K + I+ VF+  E ID + VTK
Sbjct:    4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL--------------------TVTKKEEIKTVESLDAVLEKTVDLRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTK 202

HSP 2 Score: 37.3502 bits (85), Expect = 1.063e-28
Identity = 17/33 (51.52%), Postives = 20/33 (60.61%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV  AGQ G+H RTE NK+   L S
Sbjct:  237 WRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.557 bits (44), Expect = 1.063e-28
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWGV
Sbjct:  202 KGKGFQGPVKRWGV 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METVA (50S ribosomal protein L3P OS=Methanococcus vannielii GN=rpl3p PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.063e-28
Identity = 74/223 (33.18%), Postives = 113/223 (50.67%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQA--QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S  + +E    VT++ETP +         KT +GL++L  VWA+  ++E+ R+                     T   K++I+    L+ + +    +RV+ HT   K  G+ +KK  ++EI+V G SVA+K+ +A     K + I+ VF+  E ID + VTK
Sbjct:    4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL--------------------TVTKKEEIKTVESLDAVLEKTVDLRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTK 202

HSP 2 Score: 37.3502 bits (85), Expect = 1.063e-28
Identity = 17/33 (51.52%), Postives = 20/33 (60.61%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV  AGQ G+H RTE NK+   L S
Sbjct:  237 WRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.557 bits (44), Expect = 1.063e-28
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWGV
Sbjct:  202 KGKGFQGPVKRWGV 215

The following BLAST results are available for this feature:

BLAST of EY664716 vs. ExPASy Swiss-Prot

BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80


Match Name	E-value	Identity	Description
RL3L_BOVIN	1.167e-85	56.00	60S ribosomal protein L3-like OS=Bos taurus GN=RPL...	[more]
RL3_CANGA	3.366e-85	57.78	60S ribosomal protein L3 OS=Candida glabrata GN=RP...	[more]
RL3_KLULA	2.794e-84	56.44	60S ribosomal protein L3 OS=Kluyveromyces lactis G...	[more]
RL3_YEAST	8.052e-84	58.22	60S ribosomal protein L3 OS=Saccharomyces cerevisi...	[more]
RL3_ENCCU	6.461e-51	42.48	60S ribosomal protein L3 OS=Encephalitozoon cunicu...	[more]
RL3_AERPE	4.182e-32	37.72	50S ribosomal protein L3P OS=Aeropyrum pernix GN=r...	[more]
RL3_THEGJ	4.851e-29	33.19	50S ribosomal protein L3P OS=Thermococcus gammatol...	[more]
RL3_ARCFU	6.308e-29	30.32	50S ribosomal protein L3P OS=Archaeoglobus fulgidu...	[more]
RL3_METVS	1.063e-28	33.18	50S ribosomal protein L3P OS=Methanococcus vanniel...	[more]
RL3_METVA	1.063e-28	33.18	50S ribosomal protein L3P OS=Methanococcus vanniel...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT