EY664716 | Citrus Genome Database

Overview


Name	EY664716
Unique Name	EY664716
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	908

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig2280	contig	Csv1_Contig2280:36..941.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_NATPD (50S ribosomal protein L3P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.380e-28
Identity = 68/219 (31.05%), Postives = 109/219 (49.77%), Query Frame = 3

Query:   48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTK 698
            PR GS+GF PR RA+    +  ++P DD  +P  L  F GYKAGM+H+V   ++P S    +E    VT++ETPP+          TP G R L  VW   ++E++ R                     ++ D + DI+  L+  +     +RV+ HT    +  + +K+  +ME +V GGS++ +VDFA    +   +  +  VF+  E  D+ G+TK
Sbjct:    7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQP-GLQGFAGYKAGMSHVVAINDEPNSPREGQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSL--------------SVPEEQSGDIEGDIRTALD--EGALADVRVITHTVPGALSSVPKKEPDVMETRVGGGSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITK 207

HSP 2 Score: 40.0466 bits (92), Expect = 1.380e-28
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            R+  L  W  +RV  TV + GQ GYH RTE+NK+   L
Sbjct:  235 RIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDL 272

HSP 3 Score: 21.9422 bits (45), Expect = 1.380e-28
Identity = 10/23 (43.48%), Postives = 12/23 (52.17%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHR 765
            KG+   G V RWGV +   K  R
Sbjct:  207 KGKGTQGPVKRWGVQKRKGKHAR 229

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METMP (50S ribosomal protein L3P OS=Methanococcus maripaludis GN=rpl3p PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.020e-28
Identity = 71/221 (32.13%), Postives = 111/221 (50.23%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S    +E    VT++ETP +         KT +GL++L  VWA+ L+ ++ R+                       + KK + A L+ + +  T +R + HT   K  G+ +KK  ++EI++ G SVA+++ +A     K + I  VF+  E+ID + +TK
Sbjct:    4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKL-----------------TLAKKEEKKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITK 202

HSP 2 Score: 35.4242 bits (80), Expect = 3.020e-28
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV   GQ G+H RTE NK+   L S
Sbjct:  237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.1718 bits (43), Expect = 3.020e-28
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWG+
Sbjct:  202 KGKGFQGSVKRWGI 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULTO (50S ribosomal protein L3P OS=Sulfolobus tokodaii GN=rpl3p PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.917e-28
Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKRAS      +++P    ++P +L  F+GYK GM+HI    +KP S  + KE    V++IETPP+           P+G  +  T +   ++E++ +   +                 E   GK D   ++         +RVL  TQ + +  L +KK  ++E+QV GG +  ++++      K + +  VF++ ++IDIIGVTK
Sbjct:    1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMIDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLIQQR-------KVTRLKIDKEKMKGKLD---EINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTK 214

HSP 2 Score: 30.4166 bits (67), Expect = 3.917e-28
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 2

Query:  824 VARAGQNGYHHRTEMNKKFTSLESHP 901
            V + GQ GYH RTE NK+   +   P
Sbjct:  256 VPQPGQMGYHRRTEYNKRILKISDDP 281

HSP 3 Score: 28.8758 bits (63), Expect = 3.917e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GVV R+GV  LPR  K  +G RK
Sbjct:  214 KGKGFQGVVKRYGVVELPRWHKHRKGSRK 242

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.919e-28
Identity = 64/217 (29.49%), Postives = 107/217 (49.31%), Query Frame = 3

Query:   48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            PR GSL F PRKRA     +++++  D+ +    +  F GYKAGMTH++   ++P S     E    VT++E PP+             G+R    +WA++L++++ R                           +DI+++++++ +    IRVLAHT  R + G+ +K   +MEI V G SV +++  A G    Q+ +  +F   E ID+  VTK
Sbjct:    7 PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTEGMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--------------TIPKARRGASLEDIESRVDELCE----IRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTK 202

HSP 2 Score: 40.0466 bits (92), Expect = 3.919e-28
Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 2

Query:  788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            L  W  AR+S+ V + GQ GYH RTE NK+  ++
Sbjct:  234 LGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAI 267

HSP 3 Score: 23.0978 bits (48), Expect = 3.919e-28
Identity = 10/23 (43.48%), Postives = 12/23 (52.17%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHR 765
            KG+   G V RWG+    RK  R
Sbjct:  202 KGKGTQGPVKRWGIMLQKRKHSR 224

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METM7 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.920e-28
Identity = 72/221 (32.58%), Postives = 112/221 (50.68%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S  + +E    VT++ETP +         KT +GL++L  VWA+ L+ ++ R+                       + KK   A L+ + +  T +RV+ HT   K  G+ +KK  ++EI++ G SVA+++ +A     K + I  VF+  E+ID + +TK
Sbjct:    4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDNDLGRKL-----------------TLVKKEEKKTADA-LDAVLEKATEVRVIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITK 202

HSP 2 Score: 35.4242 bits (80), Expect = 3.920e-28
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV   GQ G+H RTE NK+   L S
Sbjct:  237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.1718 bits (43), Expect = 3.920e-28
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWG+
Sbjct:  202 KGKGFQGSVKRWGI 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METM5 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.876e-27
Identity = 71/221 (32.13%), Postives = 111/221 (50.23%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S  + +E    VT++ETP +         KT +GL++L  VWA+ L+ ++ R+                       + KK   A L+ + +  T +R + HT   K  G+ +KK  ++EI++ G SVA+++ +A     K + I  VF+  E+ID + +TK
Sbjct:    4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKL-----------------TLAKKEEKKTADA-LDAVVEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAIGDVFEAGEIIDTLAITK 202

HSP 2 Score: 35.4242 bits (80), Expect = 1.876e-27
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV   GQ G+H RTE NK+   L S
Sbjct:  237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.1718 bits (43), Expect = 1.876e-27
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWG+
Sbjct:  202 KGKGFQGSVKRWGI 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_THEON (50S ribosomal protein L3P OS=Thermococcus onnurineus (strain NA1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.431e-27
Identity = 71/226 (31.42%), Postives = 105/226 (46.46%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV-----IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL + PRKRA     +++ +PKD      R+  F GYKAGMTHI+   ++PG     KE    VT++E PPL         +   GL +   VW   LN+ V+RR                      D  ++  QA+L +++          +R+L HTQ   +K   +KK  +ME  + G  V  K D+A     K++    V  + E++D+I VTK
Sbjct:    3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPKDSE---VRMLGFAGYKAGMTHILMIDDRPGLT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVKRRI----------------KTLPKDYNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTK 206

HSP 2 Score: 41.9726 bits (97), Expect = 2.431e-27
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 2

Query:  788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            L  W   RV +TV +AGQ G+HHRTE NK+  ++
Sbjct:  238 LGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAI 271

HSP 3 Score: 22.3274 bits (46), Expect = 2.431e-27
Identity = 14/41 (34.15%), Postives = 19/41 (46.34%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIGCL 798
            L ++   KG+   G V RWG+     K  R   KG  +G L
Sbjct:  199 LDVIAVTKGKGTQGPVKRWGIKIQFHKAQRA-GKGRHVGNL 238

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METM6 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.435e-27
Identity = 71/221 (32.13%), Postives = 111/221 (50.23%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P S  + +E    VT++ETP +         KT +GL++L  VWA+ L+ ++ R+                       + KK   A L+ + +  T +R + HT   K  G+ +KK  ++EI++ G SVA+++ +A     K + I  VF+  E+ID + +TK
Sbjct:    4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKL-----------------TLVKKEEKKTADA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITK 202

HSP 2 Score: 35.4242 bits (80), Expect = 2.435e-27
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W   RV +TV   GQ G+H RTE NK+   L S
Sbjct:  237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGS 269

HSP 3 Score: 21.1718 bits (43), Expect = 2.435e-27
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWG+
Sbjct:  202 KGKGFQGSVKRWGI 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METKA (50S ribosomal protein L3P OS=Methanopyrus kandleri GN=rpl3p PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.152e-27
Identity = 69/229 (30.13%), Postives = 109/229 (47.60%), Query Frame = 3

Query:   21 RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNE-EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            R   R    PR GSL F PRKRASR   +++++P ++     R+  F GYKAGMTH +   + P S    +E    VTI++ PP+          TP G R +   WA+   E E+ R F                      DG+     ++E++     V  IRV+  TQ +K  G+ +KK  +ME ++ G  V ++ ++A     ++I    VF + E++D+  +TK
Sbjct:    3 RGGRRNPGRPRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF------------------TVPKDGEAGDLDKIEELVDEGIVEEIRVIVATQPKK-AGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITK 209

HSP 2 Score: 34.2686 bits (77), Expect = 3.152e-27
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 2

Query:  806 ARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            +RV +TV  AGQ GYH RTE NK+   +
Sbjct:  247 SRVRWTVPMAGQVGYHQRTEHNKRILKI 274

HSP 3 Score: 33.113 bits (74), Expect = 3.152e-27
Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIGCL 798
            KG+   GVV RWGVT   RKT R  +KG  IG +
Sbjct:  209 KGKGFQGVVKRWGVTIQDRKTQR-KQKGRHIGSI 241

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METJA (50S ribosomal protein L3P OS=Methanocaldococcus jannaschii GN=rpl3p PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.101e-27
Identity = 71/218 (32.57%), Postives = 113/218 (51.83%), Query Frame = 3

Query:   48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            PR GSL F PRKRA R   +++++P++D     RL AF  YKAGM+H     + P S    +E    +TI+E PP+         +  R  L +L  VWA +L++E+ R+                       + +K ++  LE +K     +RVL HT   K+  L +KK  ++EI++ G  + +++++A     KQ+ I  VFQ+ E++D IGVTK
Sbjct:    8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----------------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTK 203

HSP 2 Score: 31.9574 bits (71), Expect = 4.101e-27
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            W    V ++V   GQ GYH RTE NK+   +
Sbjct:  238 WQPKMVMWSVPMPGQMGYHQRTEYNKRILKI 268

HSP 3 Score: 21.557 bits (44), Expect = 4.101e-27
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   G V RWGV
Sbjct:  203 KGKGFQGQVKRWGV 216

The following BLAST results are available for this feature:

BLAST of EY664716 vs. ExPASy Swiss-Prot

BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80


Match Name	E-value	Identity	Description
RL3_NATPD	1.380e-28	31.05	50S ribosomal protein L3P OS=Natronomonas pharaoni...	[more]
RL3_METMP	3.020e-28	32.13	50S ribosomal protein L3P OS=Methanococcus maripal...	[more]
RL3_SULTO	3.917e-28	30.67	50S ribosomal protein L3P OS=Sulfolobus tokodaii G...	[more]
RL3_METTP	3.919e-28	29.49	50S ribosomal protein L3P OS=Methanosaeta thermoph...	[more]
RL3_METM7	3.920e-28	32.58	50S ribosomal protein L3P OS=Methanococcus maripal...	[more]
RL3_METM5	1.876e-27	32.13	50S ribosomal protein L3P OS=Methanococcus maripal...	[more]
RL3_THEON	2.431e-27	31.42	50S ribosomal protein L3P OS=Thermococcus onnurine...	[more]
RL3_METM6	2.435e-27	32.13	50S ribosomal protein L3P OS=Methanococcus maripal...	[more]
RL3_METKA	3.152e-27	30.13	50S ribosomal protein L3P OS=Methanopyrus kandleri...	[more]
RL3_METJA	4.101e-27	32.57	50S ribosomal protein L3P OS=Methanocaldococcus ja...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT